Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05226 and BL03808
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence pep-align/BSNT_05226.1.5803.seq
# -bsequence pep-align/BL03808.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05226-BL03808.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05226-BL03808.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05226
# 2: BL03808
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 35/319 (11.0%)
# Similarity: 53/319 (16.6%)
# Gaps: 223/319 (69.9%)
# Score: 132.0
#
#
#=======================================
BSNT_05226 0 -------------------------------------------------- 0
BL03808 1 MDIQKPRSFRTTDRAHADLFNQVIDQLNANDESIAQFAAEAEQRSTAYTD 50
BSNT_05226 0 -------------------------------------------------- 0
BL03808 51 AHISNKGNPHGVTKSQVGLGEVINKRQATKDEFDLHHNDQTRHVTEDERN 100
BSNT_05226 0 -------------------------------------------------- 0
BL03808 101 KWNGSQIFNITGDNGQAKVYISAEDDFQTILPQYTGLIHFTAASGAINGP 150
BSNT_05226 0 -------------------------------------------------- 0
BL03808 151 GAAVRGIWTCNALGNYGQAIAFDNANRTYRKTIAGGNWTDWTELISAESL 200
BSNT_05226 1 -------------MQNGWSHYNGGEDVVFGIDASKTVWVRGEAKGGVVGT 37
:.|.|.:|.....|.:..||:.||:|.|....|.:|.
BL03808 201 EAKLANLTWHFPTLLNEWVNYADSTKVRYTKDATGTVFVEGAIAKGKIGF 250
BSNT_05226 38 TV--FTLPENMRPPRSMGCIQIA-----SGSAQVARIAYKSTGEVIVESV 80
.: |.||:..||.|:...:.:| |.:.|..|:.....|.|::|:.
BL03808 251 NIPAFVLPKGYRPSRAFQFVGVASQLGMSNTPQYHRLQVSVDGNVVIENC 300
BSNT_05226 81 SS--NPN-YIKFDFAFKAL 96
|: ||| ||...|:|||.
BL03808 301 SNTVNPNEYISLGFSFKAA 319
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