Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02092 and BL03803

See DNA alignment / Visit BSNT_02092 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence pep-align/BSNT_02092___yjmD.1.5803.seq
#    -bsequence pep-align/BL03803___yjmD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02092___yjmD-BL03803___yjmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02092___yjmD-BL03803___yjmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02092___yjmD
# 2: BL03803___yjmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity:     126/340 (37.1%)
# Similarity:   193/340 (56.8%)
# Gaps:           3/340 ( 0.9%)
# Score: 643.0
# 
#
#=======================================

BSNT_02092___      1 MKAIQVRKAYDLVTAEVKKPVLSKDDEVLVKVKRVGICGSDMHIYHGTNP     50
                     |||..:.|.|.:...::.:|. ....|||||:|..||||||:|.|.|:||
BL03803___yjm      1 MKAAVMTKPYSIEFHDIPRPE-PASGEVLVKIKAAGICGSDVHFYDGSNP     49

BSNT_02092___     51 LATLPRVIGHEVTGQVEAVGANVQSLKPGDHVVIEPISYCGSCYACRKGR    100
                     .|..|::.|||:.|.:|..||.|:....|:.|||||...||.||.|||||
BL03803___yjm     50 YAQYPQIFGHELAGIIEKTGAGVRGRSAGERVVIEPAIPCGGCYPCRKGR     99

BSNT_02092___    101 PNVCAKLSVFGVHEDGGMREYIVLPERQLHAVSKDLPWEEAVMAEPYTIG    150
                     .|.|..:.:.|....||..::|::||..:|.:.:.:.:..|.:.||::||
BL03803___yjm    100 TNACMNIDMIGSVRRGGFADFIIVPETHVHPIPEQMDFATAALCEPFSIG    149

BSNT_02092___    151 AQAVWRGQVEKGDTVLIQGAGPIGICVL-KMAKLAGAAVMMTDLNNDRLA    199
                     ||||.|..::.|:|::|.|.||||:.:| ::.|.....|:..|...:||.
BL03803___yjm    150 AQAVRRADIQTGETIVILGMGPIGLTILAQVKKRFDVRVIAVDPVRERLE    199

BSNT_02092___    200 FAKENGADAVVNVQAEHVAERVLEWTGNEGANVVIDAVCLPETFALSIEA    249
                     .|:..|||||:....|...:.:|:.||.|||.:|.:|..:|.|...|:..
BL03803___yjm    200 LAEAFGADAVIQPGEEDAEQMILKLTGGEGAGIVFEAAGIPATIEQSVRL    249

BSNT_02092___    250 VSPAGHVVVLGFDERAAQISQLPITKKEVTITGSRLQTNQFPKVVELLNG    299
                     .:.||.:|::|...|...|..|.:|||::.|.|::...||||.|::.||.
BL03803___yjm    250 AAAAGRIVIVGLTGRNVTIPGLLLTKKDIEIYGTKHSVNQFPGVIQFLNE    299

BSNT_02092___    300 GRLMHNGLVTHTFSVDDVHHAFQFIKEHPDQVRKAVITFD    339
                     ...:....||......::..|.:..|..|.||.|.:::: 
BL03803___yjm    300 NPEIARAFVTEIMPFMEIEEALKKAKNCPHQVTKIILSY-    338


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