Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02094 and BL03802

See DNA alignment / Visit BSNT_02094 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:34
# Commandline: needle
#    -asequence pep-align/BSNT_02094___uxuA.1.5803.seq
#    -bsequence pep-align/BL03802___uxuA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02094___uxuA-BL03802___uxuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02094___uxuA-BL03802___uxuA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02094___uxuA
# 2: BL03802___uxuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity:     209/366 (57.1%)
# Similarity:   264/366 (72.1%)
# Gaps:           8/366 ( 2.2%)
# Score: 1179.0
# 
#
#=======================================

BSNT_02094___      1 MNMTFRWYGRGNDTVTLEHVKQIPGVKGIVWALHQKPVGDVWEKEEIRAE     50
                     |.|.|||||.|||:||||.::|||||:|||||||.:|.|:.|..|||...
BL03802___uxu      1 MKMVFRWYGEGNDSVTLEQIRQIPGVEGIVWALHHQPPGEEWPLEEILEV     50

BSNT_02094___     51 TEYIQSYGFHAEVVESVNVHEAIKLGNEERGRYIENYKQTIRNLAGFGVK    100
                     ....:.:|||.|||||||:||.||||...|..|||.||:||.|||..|||
BL03802___uxu     51 KRQCEQHGFHIEVVESVNIHEDIKLGLPTRDLYIEKYKRTIENLAKAGVK    100

BSNT_02094___    101 VICYNFMPVFDWTRTDMFRPLEDGSTALFFEKAKVESLDPQELIRTVEDA    150
                     ||||||||||||.|||:::...|||||||:|.|||.::||..|:..:...
BL03802___uxu    101 VICYNFMPVFDWLRTDLYKKAPDGSTALFYEHAKVHTIDPFALVDQIAKH    150

BSNT_02094___    151 SDMTLPGWDPEKLARIKELFAAYRTVDEGKLWDNLSFFLQEILPVAEAYG    200
                     .:.|:|||:||:|..:..||.||:.|.|..||.:|.:||:.|:|.|...|
BL03802___uxu    151 PEFTMPGWEPERLEHLTRLFEAYQNVTEEDLWSHLHYFLERIIPTAARCG    200

BSNT_02094___    201 VQMAIHPDDPPWPIFGLPRIITGEASYKKLRAISDSPSNCITLCTGSMGA    250
                     ::|||||||||||:||||||:|...|..:|..:.|.|:|.:|||:||:||
BL03802___uxu    201 IKMAIHPDDPPWPVFGLPRIMTSGESIGRLLQLVDHPANGVTLCSGSLGA    250

BSNT_02094___    251 NPANDMVEIAKTYAGIAPFSHIRNVKIYENGDFIETSHLTKDGSINIQGV    300
                     ||.||:..:...||...||:||||||:|||||||||||.||||:::|.|:
BL03802___uxu    251 NPENDISAMIHAYADRIPFAHIRNVKVYENGDFIETSHRTKDGTVDICGI    300

BSNT_02094___    301 MEELHKQDYEGYVRPDHGRHLWGEQCRPGYGLYDRALGIMYLNGLWDAYE    350
                     ::..|:..:.||||||||||:|.|:|||||||||||||||||.|:||:..
BL03802___uxu    301 VKAYHETGFSGYVRPDHGRHIWDEKCRPGYGLYDRALGIMYLWGIWDSLN    350

BSNT_02094___    351 AMAKKEVGV-------    359
                      ..|:|...       
BL03802___uxu    351 -REKQEASKCLKSMKI    365


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