Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01180 and BL03796

See DNA alignment / Visit BSNT_01180 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_01180___yesM.1.5803.seq
#    -bsequence pep-align/BL03796___yesM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01180___yesM-BL03796___yesM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01180___yesM-BL03796___yesM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01180___yesM
# 2: BL03796___yesM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 590
# Identity:     313/590 (53.1%)
# Similarity:   424/590 (71.9%)
# Gaps:          25/590 ( 4.2%)
# Score: 1595.0
# 
#
#=======================================

BSNT_01180___      1 MKKRVAGWYRRMKIKDKLFVFLSLIMAVSFLFVYSGVQYAFHVYDEQIYR     50
                          ...|:.:||||:||:.:|||||||.:.:.||:||||.|||:||||
BL03796___yes      1 -----MNRYQHLKIKDQLFILISLIMAVSLILILSGIQYAFRVYDQQIYR     45

BSNT_01180___     51 KSSEVLRMSSERIEDELKKIEDVSYEIITDEQIQ-RILSMQNRDDTYDQY     99
                     |||:||.:||:.|||||||||||||:|.||..|| .:|......:.|.:|
BL03796___yes     46 KSSQVLMLSSKSIEDELKKIEDVSYQITTDADIQANLLKAGRGQNKYGRY     95

BSNT_01180___    100 QMKQELWDQLAGYASDEKYIDSIHVIDARGSEYSAGNSSSDLLQQEQEEV    149
                     ::|.::||:||.|...::||.|||:.||.|:|||||.:.::.|::::..:
BL03796___yes     96 RIKSKIWDKLAEYTGSKRYIKSIHLFDASGTEYSAGANLTEALREQKNAL    145

BSNT_01180___    150 CKRAKAKNGRNLWMTLGGSDPVLISARQIRSCHQLSLNGLGMVLIQVNVK    199
                     .::|..:.|.|:|..:.|....|:|.|:|||..:|:|:.||.|:|..::|
BL03796___yes    146 IEKASRQKGSNMWEPMPGETGELLSVREIRSYERLNLDHLGTVVIVADLK    195

BSNT_01180___    200 QMIRDVPKDWGDSVGDIMIADQGGNLVYTAHASAHVPEAAKETLK-----    244
                     ::|.|:|||||:..|.|.::| |..|.:     :.:|.:..:.|:     
BL03796___yes    196 RVIGDLPKDWGEGAGKIAMSD-GRELFF-----SEMPFSQTDGLRLSSHA    239

BSNT_01180___    245 HPGYDLIKKNGKRYFISYLQSSYQNWSYYNVIPFDQMFAKISFMKTVIGT    294
                     ..|||::::||:|:|:||::|:|:||:|:::||||.||:|||.|||::.:
BL03796___yes    240 ENGYDIVEENGQRFFVSYVKSAYKNWTYWSLIPFDAMFSKISAMKTILIS    289

BSNT_01180___    295 CFLLFFCVVLLFGRKIANSITEPIEQLVTAMKSVQHSGIEAGVSLSLPEH    344
                     .|:|||.:.:|||||:|..||.|||:||.|||:||:...:.......|..
BL03796___yes    290 LFILFFLIAVLFGRKMARGITSPIEKLVAAMKNVQNGDFKLAPLTRAPLD    339

BSNT_01180___    345 TQDEAGMLNRHFTVMMKRINELMEENVEKQLIIKETELKALQAQINPHFL    394
                     .|||..:|||:|..|::|||||:.||.:|||::||||.||||||||||||
BL03796___yes    340 RQDEVSVLNRNFFTMVERINELIAENYKKQLMLKETEFKALQAQINPHFL    389

BSNT_01180___    395 YNTLESINWLAKANQQKQISKMVESLGFLLRNSIHMKKDIVTIQEEADIV    444
                     ||||||||||||.|:|.|||||.|||||||||:|:||.|::||:|||:||
BL03796___yes    390 YNTLESINWLAKTNRQPQISKMTESLGFLLRNAINMKTDVLTIEEEAEIV    439

BSNT_01180___    445 RHYMTIQRFRFEERLNFTLDIDDEVKHCLIPKLTLQPLAENAIQYALEPF    494
                     |||.|||||||||||.|.|||:..||.|.:|||.|||||||||.|.||||
BL03796___yes    440 RHYFTIQRFRFEERLVFELDIEPAVKKCRVPKLVLQPLAENAITYCLEPF    489

BSNT_01180___    495 TRPCAIRIQAKKTKGCVCITVEDNGPGMDGRILES-------TDGRGIGL    537
                     ..||.|:|:|.|.:..|.:||.|||||||...||.       |.||||||
BL03796___yes    490 IEPCHIQIKAYKKEELVYLTVADNGPGMDEDFLEKARKELVRTTGRGIGL    539

BSNT_01180___    538 WNIRERISLTFGEPYGLRIQSEHEKGTRIVITIPCRNEVV    577
                     .||.|||.|.||:.|||.|.||..|||.::|.||.::.| 
BL03796___yes    540 QNIDERIQLMFGKGYGLTISSEKNKGTVMMIKIPFQSGV-    578


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01180 and BL03796

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
