Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01188 and BL03792

See DNA alignment / Visit BSNT_01188 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_01188___yesQ.1.5803.seq
#    -bsequence pep-align/BL03792___yesQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01188___yesQ-BL03792___yesQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01188___yesQ-BL03792___yesQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01188___yesQ
# 2: BL03792___yesQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     246/302 (81.5%)
# Similarity:   263/302 (87.1%)
# Gaps:          11/302 ( 3.6%)
# Score: 1249.0
# 
#
#=======================================

BSNT_01188___      1 MEPVNEPVRKA-----PVFERKK-AGRVSPKRILFHVFTATLAVLLLYPV     44
                     ||||.:...:|     |...||| ||     |::||:.||.||::|||||
BL03792___yes      1 MEPVKDISGRAAPAPLPAGNRKKRAG-----RLVFHITTAGLAIILLYPV     45

BSNT_01188___     45 IWLFVSSFKESASIFTTSHSLIPDPFILSNYAEGWKGIAGQPFLTFIKNS     94
                     |||..||||||||||.|||||||||.|||||.|||||||||||:||||||
BL03792___yes     46 IWLIASSFKESASIFATSHSLIPDPLILSNYTEGWKGIAGQPFITFIKNS     95

BSNT_01188___     95 AIIVGLSTIGAVLSSAVIAYGFARIPFKGKKFWFACMMGTLMLPHEVLMI    144
                     .|||||||.|||||||.|||||||||||||.|||:|||.|:|||||||||
BL03792___yes     96 LIIVGLSTAGAVLSSAFIAYGFARIPFKGKAFWFSCMMVTMMLPHEVLMI    145

BSNT_01188___    145 PQYIMFAKLDWLNSFKPIVVPQFFGHAFFIFLMIQFIRTIPEELDEAARI    194
                     ||||:||||||||||||||||||||||||||||||||||||.||||||:|
BL03792___yes    146 PQYIIFAKLDWLNSFKPIVVPQFFGHAFFIFLMIQFIRTIPVELDEAAKI    195

BSNT_01188___    195 DGCGRFACFWRIILPLIAPALATSAIFSFYWKWEELIQPLLYLNKPELYP    244
                     |||.|...|:|||||||||||||||||||||||||||.||||||||||||
BL03792___yes    196 DGCSRLGIFFRIILPLIAPALATSAIFSFYWKWEELINPLLYLNKPELYP    245

BSNT_01188___    245 VSLALKLFLDTESASNWGAMFAMSAVSLLPVILVFFLFQKYIVQGISTTG    294
                     ||||||||||||:|||||||||||.|||:|||||||:|||.||||||.:|
BL03792___yes    246 VSLALKLFLDTETASNWGAMFAMSVVSLVPVILVFFVFQKSIVQGISMSG    295

BSNT_01188___    295 LK    296
                     ||
BL03792___yes    296 LK    297


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