Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01188 and BL03792
See
Amino acid alignment /
Visit
BSNT_01188 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence dna-align/BSNT_01188___yesQ.1.5803.seq
# -bsequence dna-align/BL03792___yesQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01188___yesQ-BL03792___yesQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01188___yesQ-BL03792___yesQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01188___yesQ
# 2: BL03792___yesQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 925
# Identity: 665/925 (71.9%)
# Similarity: 665/925 (71.9%)
# Gaps: 65/925 ( 7.0%)
# Score: 2389.0
#
#
#=======================================
BSNT_01188___ 1 ATGGAGCCGGTCAA------------------CGAGCCTGTCAGAAAAGC 32
.||||||||||.|| ||.|||| ||
BL03792___yes 1 GTGGAGCCGGTAAAAGATATTTCGGGGCGGGCCGCGCCT---------GC 41
BSNT_01188___ 33 CCCGGTT----------TTTGAAAGAAAAAAAGCCGGGCGCGTCAGTCCC 72
||||.|| .|.||||| ||||.|||||||||..||
BL03792___yes 42 CCCGCTTCCTGCGGGAAATAGAAAG-AAAAGAGCCGGGCGTCTC------ 84
BSNT_01188___ 73 AAACGCATACTGTTCCATGTTTTTACGGCAACG--CTGGCGGTGTTGCTG 120
.||||.|||.|....||||| || ||.|||.|..|.||.
BL03792___yes 85 ---------GTGTTTCATATCACGACGGC--CGGTCTTGCGATCATCCTT 123
BSNT_01188___ 121 CTGTACCCGGTCATTTGGCTGTTTGTCAGCTCGTTTAAAGAAAGCGCCAG 170
.||||.||.||.||.||||||.|.|..|||||||||||||||||.||.||
BL03792___yes 124 TTGTATCCCGTTATCTGGCTGATCGCAAGCTCGTTTAAAGAAAGTGCGAG 173
BSNT_01188___ 171 TATTTTTACAACCTCACATTCTCTCATTCCAGACCCTTTTATTCTCAGT- 219
.||.||..|.||.||.||.||.||||||||.|||||.||.||.|| ||
BL03792___yes 174 CATATTCGCCACATCCCACTCGCTCATTCCGGACCCCTTGATCCT--GTC 221
BSNT_01188___ 220 -AACTATGCTGAAGGGTGGAAGGGTATCGCGGGACAGCCGTTTCTGACGT 268
||.|||.|.||.||.|||||.||.|||||.|||||||||||..|.||.|
BL03792___yes 222 CAATTATACGGAGGGCTGGAAAGGGATCGCCGGACAGCCGTTCATCACAT 271
BSNT_01188___ 269 TTATTAAAAACTCGGCGATCATTGTCGGACTGTCAACAATCGGTGCCGTC 318
|.||||||||.|||...|||||||||||.||.||.||...|||.||.|||
BL03792___yes 272 TCATTAAAAATTCGCTTATCATTGTCGGCCTTTCGACGGCCGGCGCGGTC 321
BSNT_01188___ 319 CTGTCATCGGCTGTCATTGCGTACGGATTTGCGCGTATTCCGTTTAAGGG 368
.||||.|||||..||||.||.||||||||.|||||.|||||||||||.||
BL03792___yes 322 TTGTCCTCGGCGTTCATCGCTTACGGATTCGCGCGGATTCCGTTTAAAGG 371
BSNT_01188___ 369 AAAAAAATTTTGGTTT-GCGTGCATGATGGGGACGTTAATGCTGCCTCAT 417
.||....||||||||| || ||||||||||.||||.|.||||||||.||.
BL03792___yes 372 GAAGGCGTTTTGGTTTAGC-TGCATGATGGTGACGATGATGCTGCCGCAC 420
BSNT_01188___ 418 GAAGTGTTGATGATTCCGCAGTATATTATGTTTGCGAAATTAGACTGGCT 467
||.|||.||||||||||||||||.||.||.|||||.||..|.||.|||||
BL03792___yes 421 GAGGTGCTGATGATTCCGCAGTACATCATTTTTGCAAAGCTGGATTGGCT 470
BSNT_01188___ 468 GAATTCCTTTAAACCAATTGTCGTTCCGCAATTTTTCGGGCATGCGTTTT 517
||||||.||.||.||.||.||.|||||.||||||||||||||.|||||||
BL03792___yes 471 GAATTCATTCAAGCCGATCGTTGTTCCCCAATTTTTCGGGCACGCGTTTT 520
BSNT_01188___ 518 TTATCTTTCTGATGATCCAGTTTATCCGGACGATTCCCGAGGAGCTGGAT 567
||||||||||||||||.|||||.|||.|||||||.||.|..||.||.|||
BL03792___yes 521 TTATCTTTCTGATGATTCAGTTCATCAGGACGATCCCGGTAGAACTCGAT 570
BSNT_01188___ 568 GAAGCCGCGCGAATCGACGGATGCGGGCG-CTTTGCCTGCTTTTGGCGGA 616
|||||.||....||.|||||.|||.|.|| ||..||.| |||||...|.|
BL03792___yes 571 GAAGCGGCAAAGATTGACGGCTGCAGCCGTCTCGGCAT-CTTTTTCAGAA 619
BSNT_01188___ 617 TCATTCTCCCGCTGATTGCCCCCGCGCTTGCGACGTCTGCGATTTTCTCC 666
|.|||.|.||..||||.||.||.|||||.||||||||.||.||.|||||.
BL03792___yes 620 TTATTTTGCCATTGATCGCACCGGCGCTCGCGACGTCCGCCATCTTCTCG 669
BSNT_01188___ 667 TTCTATTGGAAGTGGGAGGAGCTGATTCAGCCGCTTTTGTATTTGAATAA 716
||.||.||||||||||||||.|||||..|.||||||.|.||.|||||.||
BL03792___yes 670 TTTTACTGGAAGTGGGAGGAACTGATCAATCCGCTTCTTTACTTGAACAA 719
BSNT_01188___ 717 GCCGGAGCTTTACCCTGTTTCACTTGCGCTGAAGCTTTTTCTCGATACAG 766
|||||||||||||||.|||||.||.||..|.|||||.|||.|.|||||.|
BL03792___yes 720 GCCGGAGCTTTACCCGGTTTCTCTGGCATTAAAGCTGTTTTTAGATACGG 769
BSNT_01188___ 767 AGTCGGCTTCGAACTGGGGCGCGATGTTTGCCATGTCAGCCGTCTCGTTA 816
|..||||.||.||||||||.|||||||||||.|||||||.||||||..|.
BL03792___yes 770 AAACGGCGTCTAACTGGGGGGCGATGTTTGCGATGTCAGTCGTCTCACTC 819
BSNT_01188___ 817 TTGCCTGTGATTCTTGTATTCTTTTTGTTTCAGAAATATATCGTTCAGGG 866
.|.||.|||||.||.||.||.||..|.|||||.||||..|||||.||.||
BL03792___yes 820 GTCCCGGTGATCCTCGTGTTTTTCGTTTTTCAAAAATCGATCGTCCAAGG 869
BSNT_01188___ 867 CATCAGTACGACCGGATTAAAATAA 891
.|||||.|.||.|||||||||||||
BL03792___yes 870 AATCAGCATGAGCGGATTAAAATAA 894
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.