Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01189 and BL03791
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence pep-align/BSNT_01189___yesR.1.5803.seq
# -bsequence pep-align/BL03791___yesR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01189___yesR-BL03791___yesR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01189___yesR-BL03791___yesR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01189___yesR
# 2: BL03791___yesR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity: 259/344 (75.3%)
# Similarity: 303/344 (88.1%)
# Gaps: 0/344 ( 0.0%)
# Score: 1417.0
#
#
#=======================================
BSNT_01189___ 1 MAQLIFDEEKVTSVIDRIVKRTFQMDFAWDWPGGVAFYGVAEAYEATENE 50
|.:|:|||||:..||||||||||:|||.||||||||||||||||||||||
BL03791___yes 1 MTKLVFDEEKLNQVIDRIVKRTFEMDFEWDWPGGVAFYGVAEAYEATENE 50
BSNT_01189___ 51 EYINLLKTWVDEQLEDGLPPLSINGVSIGHTLLFLHKVTGDDVYLETAAE 100
||:.|||.|.||:||||||.||||||||||||:.|::.||||.||:.|.:
BL03791___yes 51 EYLELLKNWTDEKLEDGLPKLSINGVSIGHTLISLYQATGDDRYLDAARQ 100
BSNT_01189___ 101 MAEYVLHKAPRFGEGILQHTVNAAEYVFPEQAWADTLMMAGLFMLRIGRI 150
||:||||:||||.:|:||||||:.::|||||||.||:||||||:||||::
BL03791___yes 101 MADYVLHEAPRFADGVLQHTVNSEKHVFPEQAWVDTMMMAGLFLLRIGKL 150
BSNT_01189___ 151 MEREDYFEDGLRQFHGHEDVLQDPVTNLYYHAWDNKAQNHLSGIYWGRAN 200
:..|:||||||.|:||||:.|||..|||||||||:.|:|:||||:|||.|
BL03791___yes 151 VGSEEYFEDGLSQYHGHEEFLQDMETNLYYHAWDHVAKNNLSGIFWGRGN 200
BSNT_01189___ 201 GWAALTMAKALPLIEVTHPSFMIIDGSLRDQLSALVRLQDESGLWHTILD 250
||||||||||||||:|||||:|||||||||.||||||||..||||||:|.
BL03791___yes 201 GWAALTMAKALPLIDVTHPSYMIIDGSLRDLLSALVRLQHPSGLWHTVLT 250
BSNT_01189___ 251 DPDSYLEVSASAGIASALMSSGKLYTKYVQKSLAAILDAVEEDGRVSKVS 300
|||||||||.||||||.|:|.|.||.|.|||:|:||.|||..||||.:||
BL03791___yes 251 DPDSYLEVSGSAGIASGLLSRGSLYHKSVQKALSAITDAVAPDGRVERVS 300
BSNT_01189___ 301 AGTAVMKNAEGYKQVPYKRIQGWGQGLALTFLADVLKTKKRVYQ 344
||||||::|:|||.|||||||||||||||||||||:::|.|.:|
BL03791___yes 301 AGTAVMRDAQGYKDVPYKRIQGWGQGLALTFLADVVRSKSRAFQ 344
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