Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01192 and BL03790

See DNA alignment / Visit BSNT_01192 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01192___yesS.1.5803.seq
#    -bsequence pep-align/BL03790___yesS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01192___yesS-BL03790___yesS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01192___yesS-BL03790___yesS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01192___yesS
# 2: BL03790___yesS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 772
# Identity:     378/772 (49.0%)
# Similarity:   531/772 (68.8%)
# Gaps:          23/772 ( 3.0%)
# Score: 1902.0
# 
#
#=======================================

BSNT_01192___      1 MKKQPQQKERVSRWKGTYFKRNFVFILLIACIPGLLTGGAIYFLSIDKVE     50
                     |||..|:  .|||.||::||::||.|||||||||||||..:|..|..|:|
BL03790___yes      1 MKKLHQR--YVSRRKGSFFKKSFVMILLIACIPGLLTGAGVYLFSAAKIE     48

BSNT_01192___     51 KELQRSHETQVAREVSRMDEKLGVLELALTQMAYDSSLMNGLAERDLEKD    100
                     ||||..||.||.|::|::|:||..||:.|:|:|||..||||||:.||:.|
BL03790___yes     49 KELQHLHENQVKRQISQIDDKLEGLEIMLSQLAYDPRLMNGLADADLQTD     98

BSNT_01192___    101 FTFSYQLTKKLFLLRDQQPLIEQASIFLNSPRPLVLSPEYSALTEQEALR    150
                     |..:|:|:|.||||:||.|||.:..:|:....|::|:|||:.||:::.|:
BL03790___yes     99 FQTTYKLSKSLFLLQDQNPLIHKVELFIQGKEPILLNPEYNGLTDRKILK    148

BSNT_01192___    151 KYRSLLSSDHSIYWK-RSGNQA--MLIQLIPGAAEKPFGAIMLAVDPKEM    197
                     .|.|||....::||| .||..:  .|:..|||...:||||::|.:|.:|:
BL03790___yes    149 AYHSLLEGGQNVYWKDMSGASSGMALVHKIPGGILEPFGALILTLDEREL    198

BSNT_01192___    198 ESILQSLSPYPDGSALLLDQNREVL--FHEGEKDFKKTLLQEIKKQPAEN    245
                     ..:|:|||||..|:|||...|::.:  .:.|:.:|:..|.:.::||....
BL03790___yes    199 GRLLESLSPYSKGTALLFHHNQKPVSWSNRGKTNFESALKERLEKQKNPQ    248

BSNT_01192___    246 GHFQMEWEGKVYSVSFGEMNRMHQQWTFVSAAPLSAITAPMVFLSKVIIV    295
                     |.|.|:|.|..||||:|.|:|::|:||:|||:|:||||||::||||:|..
BL03790___yes    249 GSFVMDWSGGAYSVSYGRMDRLNQEWTYVSASPMSAITAPVLFLSKLIAS    298

BSNT_01192___    296 MLVICIGLAVCMTWYASKKIYRPIQHLLGLFTGGEKKTWQASGQDEFKWI    345
                     :.:..|.||..:.||||.|||.|:..|:.|.:|..|   .|...|||.|:
BL03790___yes    299 VSIAGIVLAFILAWYASHKIYSPVARLIKLCSGEGK---AAYFPDEFHWL    345

BSNT_01192___    346 EKRWQDLSLESRKLQEQLLRQTPHMKKSFLQHLLQGDFYYDNEDSLRSRM    395
                     ||||:|||.||.:|:::|    ||....|.|.||.|.|..::|.:||.|:
BL03790___yes    346 EKRWEDLSEESGRLKKEL----PHAANVFFQRLLSGYFADESERNLRDRL    391

BSNT_01192___    396 EEAGWNIGENVFHVLDLQVTGLRCEKSVFREGDEQLAVFTLTNLAEELAD    445
                     :..||...:|||.::|:|:|||......|.:.||.||.|.|.|:..|||.
BL03790___yes    392 KRWGWEAKDNVFTIIDVQLTGLYEGNGSFTKKDESLAGFLLGNITRELAG    441

BSNT_01192___    446 KRVFQLSILDIGRLSVTVLVMKTNSSDLKAYITELARQFGDV----TGLC    491
                     :....:.:.|:..||:.||:....::..|..|.:..|:..||    :.|.
BL03790___yes    442 RTFNHIYMTDVRSLSLAVLLASGRNTAFKEEIAQFVRELTDVIYSISKLH    491

BSNT_01192___    492 LTSTLSSKTERITEIPSLFQNVKCGKSRRKFANRDQVIDL--QADFPQDE    539
                     :|.|:|...:::.:||.:::.||.|:..|:|.|..|||||  :.|.|..|
BL03790___yes    492 VTVTVSKTADKLKDIPGIYEEVKEGRHYRQFENASQVIDLSRREDMPPAE    541

BSNT_01192___    540 QFAPYYPFELEKQIVQAIRLERKQEAKELIDGCMKELAEKAAIDRHVHSA    589
                     .   ||||.|||::|:|:|||.:.|.:..|...::||:||...:..:...
BL03790___yes    542 S---YYPFALEKEVVRALRLEERDEVERRIRLFIRELSEKGKTEIRIQPG    588

BSNT_01192___    590 LIQLFSRIQEDILHSGLNPSELFQHRNPFLDISELREPNEAAAWLMDAVV    639
                     ::|||::|||:|.||||:|.|||..:|...::||||||..|..|:|:..:
BL03790___yes    589 MMQLFAKIQEEIFHSGLHPYELFSRKNLLQELSELREPERAVGWMMERCI    638

BSNT_01192___    640 TPYLSKLEGRKNRQQKQLAERVIAMIHEQYMADISLESCADALGMNSYTL    689
                     :|||.::|||||||||:|.|:|:.|||:.||.|||||||||..|.|||||
BL03790___yes    639 SPYLKEMEGRKNRQQKRLVEQVLEMIHQDYMNDISLESCADRAGTNSYTL    688

BSNT_01192___    690 SKAFKQVTGINFIDYVTQIRIEKAKELLVNTNKKIHDVSEEVGYRHNYFN    739
                     |||||||||||||||||::|||||||||:.||||||||||||||||:|||
BL03790___yes    689 SKAFKQVTGINFIDYVTRLRIEKAKELLLETNKKIHDVSEEVGYRHSYFN    738

BSNT_01192___    740 RIFKKQVGMPPGVFRQMYQETP    761
                     ||||||||:||..:||::||:.
BL03790___yes    739 RIFKKQVGIPPSRYRQIHQESS    760


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01192 and BL03790

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
