Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01195 and BL03788

See DNA alignment / Visit BSNT_01195 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01195___yesU.1.5803.seq
#    -bsequence pep-align/BL03788___yesU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01195___yesU-BL03788___yesU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01195___yesU-BL03788___yesU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01195___yesU
# 2: BL03788___yesU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity:     142/230 (61.7%)
# Similarity:   168/230 (73.0%)
# Gaps:          10/230 ( 4.3%)
# Score: 773.5
# 
#
#=======================================

BSNT_01195___      1 ----MYKEGACLYHNPLRSVSDVKDWRMEGGGQISFDDHSLHLSH-----     41
                         ..:||:.:|.|||.|..|::.|.|||.|.:.|.:..||:.:     
BL03788___yes      1 MPECNGREGSLIYQNPLSSPEDLRGWVMEGKGIVRFQNGRLHMENELDAE     50

BSNT_01195___     42 -VQDEAHFVFWCPETFPDGIIVTWDFSPIEQPGLCMLFFAAAGIRGEDLF     90
                      ..|:||||:||||||||||:|.|||.|:.:|||||:||||||:.|||||
BL03788___yes     51 QYGDDAHFVYWCPETFPDGIVVKWDFYPVREPGLCMIFFAAAGMNGEDLF    100

BSNT_01195___     91 DTSLRKRTGTYPEYHSGDINALHLSYFRRKYPEERAFRTCNLRKSRGFHL    140
                     |..|.:|||.||:|||||||.|||||||.|:.:|||||||||||||||||
BL03788___yes    101 DGRLAERTGKYPQYHSGDINTLHLSYFRHKHADERAFRTCNLRKSRGFHL    150

BSNT_01195___    141 AEMGADPLPSPDDADSPYRMKLIKDKGYVHFSINGLPILEWMDDGSTYGP    190
                     ...||||||...||..|||||||||..||.||||.||||||.|||..:||
BL03788___yes    151 VCEGADPLPPAADALPPYRMKLIKDGAYVRFSINELPILEWTDDGRRFGP    200

BSNT_01195___    191 VLTKGKIGFRQMAPMKAAYRDFAVHQAVRR    220
                     |...||||||||||::|||.:|.|.:.:|.
BL03788___yes    201 VYGAGKIGFRQMAPLEAAYANFEVRRLLRG    230


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