Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01196 and BL03787
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence pep-align/BSNT_01196___yesV.1.5803.seq
# -bsequence pep-align/BL03787___yesV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01196___yesV-BL03787___yesV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01196___yesV-BL03787___yesV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01196___yesV
# 2: BL03787___yesV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity: 102/210 (48.6%)
# Similarity: 128/210 (61.0%)
# Gaps: 24/210 (11.4%)
# Score: 539.0
#
#
#=======================================
BSNT_01196___ 1 ----------------MVKIAWLNGLWLLFTLLGGVLFGWAPSTAAMCAV 34
::|||||||:|:||||.||::||||||||||..|
BL03787___yes 1 MRDKGVMAMMYGACEAIMKIAWLNGIWVLFTLGGGIVFGWAPSTAAMFTV 50
BSNT_01196___ 35 IRKWLMGQKDVPIFPLFLDTYKKEFLKVNAIGLAFSALLLILSANYHYFS 84
:||||:|:.|.|:|..|..||||||.|.|.:||.......||..||.:|.
BL03787___yes 51 VRKWLLGRTDAPLFKTFYQTYKKEFFKANGLGLILITAGTILFVNYQFFR 100
BSNT_01196___ 85 ASTDWLSFAVTSCTLLAGLLYIIALMYVFPLYVHYQLPLRKYIPQALLFG 134
...|..|..::..||:|||:|::..:|:||||||.|||..:|..||.|.|
BL03787___yes 101 VRADLFSIMISYATLVAGLIYLVVFIYIFPLYVHVQLPFVRYFSQAALIG 150
BSNT_01196___ 135 AMRPLTT-GCMLIGCGFVLYLLYTLPGLIPFYGPCLFGLVLMFFALRGFQ 183
.:||||| |....|| .|:|:|.|:||||||||..||.||.||.|.|.|.
BL03787___yes 151 LVRPLTTAGMAAAGC-LVVYVLLTVPGLIPFYGVSLFALVSMFIAHRCFL 199
BSNT_01196___ 184 KTEARHHQAG 193
:.|.
BL03787___yes 200 RLEG------ 203
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