Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01196 and BL03787

See DNA alignment / Visit BSNT_01196 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_01196___yesV.1.5803.seq
#    -bsequence pep-align/BL03787___yesV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01196___yesV-BL03787___yesV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01196___yesV-BL03787___yesV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01196___yesV
# 2: BL03787___yesV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 210
# Identity:     102/210 (48.6%)
# Similarity:   128/210 (61.0%)
# Gaps:          24/210 (11.4%)
# Score: 539.0
# 
#
#=======================================

BSNT_01196___      1 ----------------MVKIAWLNGLWLLFTLLGGVLFGWAPSTAAMCAV     34
                                     ::|||||||:|:||||.||::||||||||||..|
BL03787___yes      1 MRDKGVMAMMYGACEAIMKIAWLNGIWVLFTLGGGIVFGWAPSTAAMFTV     50

BSNT_01196___     35 IRKWLMGQKDVPIFPLFLDTYKKEFLKVNAIGLAFSALLLILSANYHYFS     84
                     :||||:|:.|.|:|..|..||||||.|.|.:||.......||..||.:|.
BL03787___yes     51 VRKWLLGRTDAPLFKTFYQTYKKEFFKANGLGLILITAGTILFVNYQFFR    100

BSNT_01196___     85 ASTDWLSFAVTSCTLLAGLLYIIALMYVFPLYVHYQLPLRKYIPQALLFG    134
                     ...|..|..::..||:|||:|::..:|:||||||.|||..:|..||.|.|
BL03787___yes    101 VRADLFSIMISYATLVAGLIYLVVFIYIFPLYVHVQLPFVRYFSQAALIG    150

BSNT_01196___    135 AMRPLTT-GCMLIGCGFVLYLLYTLPGLIPFYGPCLFGLVLMFFALRGFQ    183
                     .:||||| |....|| .|:|:|.|:||||||||..||.||.||.|.|.|.
BL03787___yes    151 LVRPLTTAGMAAAGC-LVVYVLLTVPGLIPFYGVSLFALVSMFIAHRCFL    199

BSNT_01196___    184 KTEARHHQAG    193
                     :.|.      
BL03787___yes    200 RLEG------    203


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