Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01212 and BL03779
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence pep-align/BSNT_01212.1.5803.seq
# -bsequence pep-align/BL03779___yetA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01212-BL03779___yetA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01212-BL03779___yetA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01212
# 2: BL03779___yetA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 863
# Identity: 211/863 (24.4%)
# Similarity: 238/863 (27.6%)
# Gaps: 562/863 (65.1%)
# Score: 1160.0
#
#
#=======================================
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 1 MKAQAELKWLNRAPASFGGVTWGVPWAKGVLQKGETAVIASENAPYLQTW 50
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 51 PLAYWPDGSIKWTGHAAVFPEESGRRFTLQKGKPGAPKTVVRVSEQKDEI 100
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 101 TVNTGAIVCKLGKSGPALIRSISISGEMMAKEGRLIALKEKRSGSDTQSM 150
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 151 YYIERFESLVKRAAIEQNGPVKTVIKIEGVHRGGGIDVWLPFTVRLSFYA 200
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 201 GVPSIRIVHTIFIDCNAETEWIKGLGLEMSAVLSGAPRNRHIRYAADGGI 250
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 251 YGEASQLLVTRRFNETNGFYERQIAGQPVPEESEVVRDAEKNAVWNDFKL 300
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 301 IQDSPVHWRLKKRTGKDCAWVDAIHGGRAKGLMYAGGENGGIALGLRNFF 350
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 351 EKYPSSLEAQGLAGGETKLTAWFWPPEAEAMDFRHYSKGTHVESAYEGFA 400
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 401 EMRSTAVGIANTSEVNLACFSNPPSNEELNRAADEWQNPPLLICEPDYYY 450
BSNT_01212 0 -------------------------------------------------- 0
BL03779___yet 451 DTRALGVWSLKDKRRPLSAALEDQLDEALKFYMNEVEQRGWYGYWHYGDV 500
BSNT_01212 1 ---------------------------------------------MAEAM 5
|||||
BL03779___yet 501 MHTYDAVRHVWRYDLGGYAWQNTELVPNLWLWQSFFRSGREDIFRMAEAM 550
BSNT_01212 6 TRHTSETDSFHLGEYAGLGSRHNVVHWGCGCKEARISMAGLYKFYYYLTG 55
||||||.|.:|.|:|.||||||||:||||||||||||||||:|.||:||.
BL03779___yet 551 TRHTSEIDCYHFGDYKGLGSRHNVLHWGCGCKEARISMAGLHKPYYFLTA 600
BSNT_01212 56 DERTGDLLTEVKDADYALVKTDPMRAFYEKGKHPTHARTGPDWAAFCSNW 105
|||||::||||||||.||...|||||:|.:.:.|.|||.|||||||||||
BL03779___yet 601 DERTGEVLTEVKDADRALEMLDPMRAYYPEKEFPAHARVGPDWAAFCSNW 650
BSNT_01212 106 LAEWERTENPEYLKKIETGINCLKWLPLRLLSGPTFEYDPATSMLHHMGD 155
|.|||||.:..||.||..||..||.|||||||||||.|||..|.|.||||
BL03779___yet 651 LTEWERTGDEAYLDKINRGIGRLKALPLRLLSGPTFGYDPKASDLLHMGD 700
BSNT_01212 156 GIAGGYHMIIAFGAPQVWMELAELLDDREWEDMLSKFGEFYTLSDEEKRK 205
|..|||||:|||||||.||||||||:|.||::||.:|||||.|:||||||
BL03779___yet 701 GNHGGYHMVIAFGAPQTWMELAELLEDNEWKEMLGEFGEFYLLADEEKRK 750
BSNT_01212 206 KSGGALHDRHFHWPMFAAGMTAYAARKKQDPHLAAKAWNLLLDDKLSHTP 255
:|||.|||..||||||:|.|.|||||..||..||.|||.||||:|.||||
BL03779___yet 751 RSGGKLHDDLFHWPMFSAAMAAYAARLHQDRKLAEKAWRLLLDEKQSHTP 800
BSNT_01212 256 LPIKPERIETWTQLEELPWVTTNTVSQWCLNVIAALELIRITAGIS---- 301
|||.|:::..|..:.|:||||||.|||||||.||.|||::......
BL03779___yet 801 LPIAPKQVHAWNTITEIPWVTTNCVSQWCLNTIAVLELLKDMPPDQDMQE 850
BSNT_01212 301 ------------- 301
BL03779___yet 851 KIIKAMKDHPARV 863
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