Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01219 and BL03776

See DNA alignment / Visit BSNT_01219 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:44
# Commandline: needle
#    -asequence pep-align/BSNT_01219___lplC.1.5803.seq
#    -bsequence pep-align/BL03776___lplC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01219___lplC-BL03776___lplC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01219___lplC-BL03776___lplC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01219___lplC
# 2: BL03776___lplC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     256/295 (86.8%)
# Similarity:   276/295 (93.6%)
# Gaps:           1/295 ( 0.3%)
# Score: 1322.0
# 
#
#=======================================

BSNT_01219___      1 MAEIHTMHNTKAGRVFDVCNILFLGGVGAITILPFLYIIAGSFATEAELA     50
                     |:...|:||||||||||..|::|||..|.||:||||||||||||||||||
BL03776___lpl      1 MSGAETIHNTKAGRVFDWFNVIFLGCCGLITVLPFLYIIAGSFATEAELA     50

BSNT_01219___     51 QRSFFIFPKTFTLDAYKYVFSTPTFLRSMGVSIFITVVGTAVQLFFTFTM    100
                     :|||||||:||:||||:|:||||||:||||||:.||||||.|||||||||
BL03776___lpl     51 ERSFFIFPETFSLDAYRYIFSTPTFIRSMGVSVLITVVGTIVQLFFTFTM    100

BSNT_01219___    101 AYPLAKRHVKGRNLLLNLVIFSMLFSGGMIPMYLVVKSLGLLDTYWALIL    150
                     ||||||||:||||||||||||:|||||||||.|:|||||||||:||||||
BL03776___lpl    101 AYPLAKRHIKGRNLLLNLVIFAMLFSGGMIPTYIVVKSLGLLDSYWALIL    150

BSNT_01219___    151 PMAINPFNLIIIKNFFQQLPRELEESAKIDGCSEIGVFWRIALPLSKPVI    200
                     ||||||||||||||||||||:|||||||||||||||||.|||||||||:|
BL03776___lpl    151 PMAINPFNLIIIKNFFQQLPKELEESAKIDGCSEIGVFLRIALPLSKPII    200

BSNT_01219___    201 ATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTILSDLTATNGDT    250
                     ||||||||||||||||||||||||||||||||||||||||||||.|..|.
BL03776___lpl    201 ATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTILSDLTGTTNDM    250

BSNT_01219___    251 MQNAVPPEQGIKLAVIVIATLPILAVYPFLQKHFAKGMLIGSVKG    295
                     |: .|||||.|||||||||||||||||||||||||||:|||||||
BL03776___lpl    251 ME-TVPPEQSIKLAVIVIATLPILAVYPFLQKHFAKGILIGSVKG    294


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.