Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01219 and BL03776
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence dna-align/BSNT_01219___lplC.1.5803.seq
# -bsequence dna-align/BL03776___lplC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01219___lplC-BL03776___lplC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01219___lplC-BL03776___lplC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01219___lplC
# 2: BL03776___lplC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 904
# Identity: 688/904 (76.1%)
# Similarity: 688/904 (76.1%)
# Gaps: 35/904 ( 3.9%)
# Score: 2556.0
#
#
#=======================================
BSNT_01219___ 1 ATG------GCTGAAATTCACACGATGCACAACACCAAAGCCGGACGGGT 44
||| ||.||| |||||.||.|||||.|||||.||.|||||
BL03776___lpl 1 ATGTCCGGTGCGGAA------ACGATCCATAACACAAAAGCGGGCCGGGT 44
BSNT_01219___ 45 GTTTGA--CGTCTGCAACATTCTGTTTCTCGGC-GGTGTCGGCGCGATTA 91
|||.|| .||.| ||..|..|.||||||||| |.|| |||...|||.|
BL03776___lpl 45 GTTCGATTGGTTT--AATGTGATCTTTCTCGGCTGCTG-CGGACTGATAA 91
BSNT_01219___ 92 CCATTTTGCCGTTTTTATATATTATCGCCGGTTCCTTTGCGACAGAAGCG 141
||.|.|||||.|||.|.|||||||||||.||.||.||||||||.||.||.
BL03776___lpl 92 CCGTCTTGCCTTTTCTGTATATTATCGCGGGGTCATTTGCGACGGAGGCC 141
BSNT_01219___ 142 GAACTCGCCCAGCGGAGCTTCTTTAT-TTTCCCGAAAACCTTTACACTTG 190
||.||.||..|..||||||||||||| ||||||| |.||.||..|.||||
BL03776___lpl 142 GAGCTGGCGGAAAGGAGCTTCTTTATCTTTCCCG-AGACGTTCTCGCTTG 190
BSNT_01219___ 191 ATGCTTACAAGTATGTGTTTTCGACACCGACGTTCCTTCGAAGCATGGGC 240
|.||.|||...|||.|.|||||.||.|||||.||..|..|.||||||||.
BL03776___lpl 191 ACGCGTACCGCTATATTTTTTCAACGCCGACATTTATCAGGAGCATGGGG 240
BSNT_01219___ 241 GTGTCCAT-CTTCATCACGGTGGTTGGGACGGCTGTACAGCTGTTTTTTA 289
|||||..| ||| ||.|||||.||.||.|||...||.|||||.|||||||
BL03776___lpl 241 GTGTCTGTGCTT-ATAACGGTCGTGGGAACGATCGTCCAGCTCTTTTTTA 289
BSNT_01219___ 290 CCTTCACGATGGCGTATCCGCTGGCGAAGCGGCATGTGAAGGGACGGAAT 339
|.||.||||||||.|||||.||.||.||.|||||..|.||||||.|||||
BL03776___lpl 290 CATTTACGATGGCCTATCCTCTTGCAAAACGGCACATCAAGGGAAGGAAT 339
BSNT_01219___ 340 CTGCTGTTGAATCTGGTGATTTTCTCCATGCTGTTTTCA--GGCGGCATG 387
|||||.||||||||.||.|||||..|.|||| |||||| ||.||.|||
BL03776___lpl 340 CTGCTTTTGAATCTCGTCATTTTTGCGATGC--TTTTCAGCGGAGGAATG 387
BSNT_01219___ 388 ATTCCGATGTACCTTGTCGTAAAATCACTTGGCCTTTTGGATACGTATTG 437
|||||||.|||..|.|||||.||||||||.||.||..|.|||.|.|||||
BL03776___lpl 388 ATTCCGACGTATATCGTCGTCAAATCACTGGGACTGCTCGATTCCTATTG 437
BSNT_01219___ 438 GGCATTGATTCTGCCGATGGCGATTAATCCGTTCAACCTGATTATTATCA 487
|||..|||||.|||||||||||||.||.||||||||.||.||||||||.|
BL03776___lpl 438 GGCGCTGATTTTGCCGATGGCGATCAACCCGTTCAATCTCATTATTATTA 487
BSNT_01219___ 488 AAAACTTCTTTCAGCAGCTGCCGCGCGAGCTGGAGGAATCAGCAAAAATT 537
|||||||.|||||||||||.|||...|||||.|||||.||.||.||.|||
BL03776___lpl 488 AAAACTTTTTTCAGCAGCTTCCGAAAGAGCTTGAGGAGTCGGCCAAGATT 537
BSNT_01219___ 538 GACGGCTGTTCCGAAATCGGCGTCTTCTGGCGGATCGCCCTGCCACTGTC 587
|||||||||||.|||||||||||.||||...|||||||.|||||.|||||
BL03776___lpl 538 GACGGCTGTTCAGAAATCGGCGTGTTCTTAAGGATCGCACTGCCGCTGTC 587
BSNT_01219___ 588 AAAGCCGGTTATAGCGACCTTTGCGCTGTTTTATGCGGTCGGGATTTGGA 637
.||||||.||||.|||||.|||||||||||||||||||||||.|||||||
BL03776___lpl 588 TAAGCCGATTATTGCGACTTTTGCGCTGTTTTATGCGGTCGGCATTTGGA 637
BSNT_01219___ 638 ATGATTTCTTCCACGCTCTCTTATATATCAATGACAGTGCAAAATGGCCG 687
|.||.||.|||||.|||.|..|.||.||||||||||||||.|||||||||
BL03776___lpl 638 ACGACTTTTTCCATGCTTTGCTGTACATCAATGACAGTGCGAAATGGCCG 687
BSNT_01219___ 688 CTGCAAATGGTGCTTCGCCAAGTCACGATTTTATCGGATTTAACAG---C 734
||||||||||||||.||||||||.||||||.|.||||||.|.||.| |
BL03776___lpl 688 CTGCAAATGGTGCTGCGCCAAGTGACGATTCTTTCGGATCTGACGGGGAC 737
BSNT_01219___ 735 GACCAATGGCGATACGATGCAAAATGCCGTTCCGCCGGAGCAGGGAATTA 784
|||.||| ||||.||||.||| |.||.|||||.||.||....||.|
BL03776___lpl 738 GACGAAT---GATATGATGGAAA---CGGTGCCGCCTGAACAATCGATCA 781
BSNT_01219___ 785 AACTCGCTGTCATTGTCATTGCAACGCTGCCGATTTTGGCGGTCTATCCA 834
||||.||.|||||.||||||||.|||||.||||||||.||.||.||.||.
BL03776___lpl 782 AACTGGCCGTCATCGTCATTGCGACGCTTCCGATTTTAGCCGTGTACCCG 831
BSNT_01219___ 835 TTTTTACAAAAACACTTTGCAAAGGGAATGCTGATCGGTTCGGTGAAAGG 884
|||||.||.||.||.|||||.||.||.||.||||||||.||.|||||.||
BL03776___lpl 832 TTTTTGCAGAAGCATTTTGCCAAAGGCATTCTGATCGGGTCTGTGAAGGG 881
BSNT_01219___ 885 CTGA 888
.|.|
BL03776___lpl 882 ATAA 885
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