Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02176 and BL03775

See DNA alignment / Visit BSNT_02176 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_02176___ykcA.1.5803.seq
#    -bsequence pep-align/BL03775___ykcA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02176___ykcA-BL03775___ykcA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02176___ykcA-BL03775___ykcA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02176___ykcA
# 2: BL03775___ykcA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     215/317 (67.8%)
# Similarity:   252/317 (79.5%)
# Gaps:           1/317 ( 0.3%)
# Score: 1117.0
# 
#
#=======================================

BSNT_02176___      1 MKVNGIHHVSALTADAQKNLDFYKKVLGLKLVKKSVNQDEPTMYHLFYGD     50
                     |.||||||||||||:||.|||||.|.||:||:|||||||:||||||||||
BL03775___ykc      1 MNVNGIHHVSALTANAQHNLDFYVKGLGMKLIKKSVNQDDPTMYHLFYGD     50

BSNT_02176___     51 EVANPGTELTFFEIPRIAPFHAGTNSISSIGLRVPSTEALHYWKERFEEQ    100
                     |||:||::|||||||.:|....|||.||::.||||..:||.:|::|..|.
BL03775___ykc     51 EVASPGSDLTFFEIPMLARRREGTNCISAVSLRVPGEQALEFWEKRLHEL    100

BSNT_02176___    101 QVTHSGISKRAGRDIMAFQDHEGQRLVLTADEEGKGYGLPVKQSGIPEEF    150
                     .....||..||||.|:.|.|||||.::..|||:||.:|:|||...|||:.
BL03775___ykc    101 GTEICGIETRAGRSILRFLDHEGQNMMFVADEKGKDHGVPVKNGVIPEDA    150

BSNT_02176___    151 SFRGLGPVELTVPYAEPTLHVLTNILGFTEISREPVEGQG-TAVILESGE    199
                     :.||||||||||..|.||..|||:||||.:|..|..:..| |..|.||||
BL03775___ykc    151 AIRGLGPVELTVRDAGPTAAVLTDILGFHKIGEEQADESGQTLHIFESGE    200

BSNT_02176___    200 GGAATEIHLIERNDLPRERQGKGSVHHVAFRVRDEEELAGWHRIISREGF    249
                     |||.||:|:.:.:|..|||.|:||||||||||:|||||..||.|||..||
BL03775___ykc    201 GGAGTEVHVKQSDDGRRERPGRGSVHHVAFRVKDEEELKQWHEIISENGF    250

BSNT_02176___    250 SNSGIVERYYFKALYFREPNGILFELSTDGPGFMVDENLDELGQTIALPP    299
                     |||||||||||||||||||||||||||||||||.|||::|||||::||||
BL03775___ykc    251 SNSGIVERYYFKALYFREPNGILFELSTDGPGFAVDESIDELGQSLALPP    300

BSNT_02176___    300 YLEHRRAEIEAKLKPIQ    316
                     ||||||.||||:||||:
BL03775___ykc    301 YLEHRRKEIEARLKPIR    317


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