Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02181 and BL03772

See DNA alignment / Visit BSNT_02181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_02181___dppA.1.5803.seq
#    -bsequence pep-align/BL03772___dppA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02181___dppA-BL03772___dppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02181___dppA-BL03772___dppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02181___dppA
# 2: BL03772___dppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     220/274 (80.3%)
# Similarity:   247/274 (90.1%)
# Gaps:           0/274 ( 0.0%)
# Score: 1156.0
# 
#
#=======================================

BSNT_02181___      1 MKLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFNSG     50
                     |||||||||||||||||||||||.|.||||||.|||:|||:.|.|||.:|
BL03772___dpp      1 MKLYMSVDMEGISGLPDDTFVDSSKPNYERGRKIMTDEANHVIDEAFKNG     50

BSNT_02181___     51 CTEVLVNDSHSKMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFTGALF    100
                     |.||:|||||||||||::|:|||||.||||||||||||:|||||:.||:|
BL03772___dpp     51 CREVIVNDSHSKMNNLLIERLHPEARLISGDVKPFSMVQGLDDTYDGAVF    100

BSNT_02181___    101 LGYHARASTPGVMSHSMIFGVRHFYINDRPVGELGLNAYVAGYYDVPVLM    150
                     :|||||||..||||||||||||||||||:.|||||.||||||||.|||:|
BL03772___dpp    101 VGYHARASMRGVMSHSMIFGVRHFYINDQAVGELGFNAYVAGYYGVPVIM    150

BSNT_02181___    151 VAGDDRAAKEAEELIPNVTTAAVKQTISRSAVKCLSPAKAGRLLTEKTAF    200
                     .|||..||.|||||||||||||||:|:||||||||:|.||||||.|:.|:
BL03772___dpp    151 AAGDSEAAAEAEELIPNVTTAAVKETVSRSAVKCLTPEKAGRLLRERMAY    200

BSNT_02181___    201 ALQNKDKVKPLTPPDRPVLSIEFANYGQAEWANLMPGTEIKTGTTTVQFQ    250
                     |:||:.:||||||||||||.||||||||||||:||||.||:..||||::|
BL03772___dpp    201 AIQNRGQVKPLTPPDRPVLRIEFANYGQAEWASLMPGAEIEPQTTTVRYQ    250

BSNT_02181___    251 AKDMLEAYQAMLVMTELAMRTSFC    274
                     |||:|||||||||||||||||:|.
BL03772___dpp    251 AKDILEAYQAMLVMTELAMRTTFS    274


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.