Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02181 and BL03772

See Amino acid alignment / Visit BSNT_02181 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence dna-align/BSNT_02181___dppA.1.5803.seq
#    -bsequence dna-align/BL03772___dppA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02181___dppA-BL03772___dppA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02181___dppA-BL03772___dppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02181___dppA
# 2: BL03772___dppA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 835
# Identity:     625/835 (74.9%)
# Similarity:   625/835 (74.9%)
# Gaps:          20/835 ( 2.4%)
# Score: 2241.0
# 
#
#=======================================

BSNT_02181___      1 ATGAAATTGTACATGTCAGTAGATATGGAAGGTATTTCGGGTCTTCCGGA     50
                     .||||..||||.|||||.||.||||||||.||.|||||.||.||||||||
BL03772___dpp      1 GTGAAGCTGTATATGTCTGTTGATATGGAGGGGATTTCCGGGCTTCCGGA     50

BSNT_02181___     51 CGATACCTTTGTGGATTCCGGCAAGCGGAATTATGAACGCGGACGGCTTA    100
                     .|||||.||.||.|||||..||||||.|||.|||||..|.||.|||...|
BL03772___dpp     51 TGATACGTTCGTCGATTCAAGCAAGCCGAACTATGAGAGAGGCCGGAAGA    100

BSNT_02181___    101 TCATGACTGAAGAAGCAAACTACTGT-ATTGCTGAAGCGTTTAACAGCGG    149
                     |||||||.||.||.||.|| |..||| ||||..||||||||.||.|..||
BL03772___dpp    101 TCATGACGGACGAGGCCAA-TCATGTGATTGACGAAGCGTTCAAAAATGG    149

BSNT_02181___    150 GTGTACCGAGGTGCTGGTCAATGACAGTCATTCGAAGATGAATAATCTGA    199
                     .||.|..||||||.|.||.||||||||.||.||.||.|||||.||.|||.
BL03772___dpp    150 ATGCAGAGAGGTGATTGTTAATGACAGCCACTCTAAAATGAACAACCTGT    199

BSNT_02181___    200 TGGTTGAAAAGCTTCACCCTGAAGC-AGACTTGATTTCTGGTGACGTCAA    248
                     |..||||.|.|||.||.|||||||| .|.||| |||||.||.||.|||||
BL03772___dpp    200 TAATTGAGAGGCTCCATCCTGAAGCGCGGCTT-ATTTCGGGAGATGTCAA    248

BSNT_02181___    249 ACCATTTTCAATGGTGGAGGGACTGGATGATACGTTTAC--AGGCGCTTT    296
                     .||.|||||.|||||..||||.||.||||||||  .|||  .||.||..|
BL03772___dpp    249 GCCGTTTTCGATGGTTCAGGGGCTTGATGATAC--ATACGACGGAGCCGT    296

BSNT_02181___    297 GTTTCTCGGTTATCATGCGAGAGCCTCGACTCCCGGTGTCATGTCACACA    346
                     |||..||||.||.|||||||||||.||||.....||.||.|||||.||||
BL03772___dpp    297 GTTCGTCGGCTACCATGCGAGAGCGTCGATGAGAGGCGTGATGTCGCACA    346

BSNT_02181___    347 GCATGATTTTCGGCGTCCGTCATTTTTACATAAACGATCGGCCTGTCGGT    396
                     |||||||||||||||||.|.|||||||||||.|||||||.|.|.|||||.
BL03772___dpp    347 GCATGATTTTCGGCGTCAGACATTTTTACATCAACGATCAGGCGGTCGGC    396

BSNT_02181___    397 GAGCTTGGATTAAATGCATACGTTGCCGGTTATTATGATGTCCCGGTATT    446
                     |||||.||.||.||.||.||.||||||||||||||.|..||||||||..|
BL03772___dpp    397 GAGCTGGGGTTCAACGCCTATGTTGCCGGTTATTACGGCGTCCCGGTCAT    446

BSNT_02181___    447 AATGGTAGCCGGGGATGACCG---GGCGGCGAAG--GAAGCGGAAGAGCT    491
                     .||||..|||||   ||||.|   ||||||  ||  ||.|||||.|||||
BL03772___dpp    447 CATGGCTGCCGG---TGACAGCGAGGCGGC--AGCTGAGGCGGAGGAGCT    491

BSNT_02181___    492 TATCCCGAACGTGACGACAGCCGCAGTCAAACAAACCATTTCAAGATCCG    541
                     .||.||||||||.||||||||.||.||||||.||||..|.||..|.||.|
BL03772___dpp    492 GATTCCGAACGTAACGACAGCAGCCGTCAAAGAAACGGTCTCCCGTTCGG    541

BSNT_02181___    542 CAGTGAAGTGCTTGTCCCCTGCGAAAGCCGGACGGCTGTTGACAGAAAAA    591
                     |.||.||.||..||.|.||.|.||||||.||.|||||.||.|.||||...
BL03772___dpp    542 CGGTCAAATGTCTGACGCCGGAGAAAGCGGGGCGGCTATTAAGAGAACGG    591

BSNT_02181___    592 ACCGCGTTTGCCCTGCAAAA-CAAGGACAAAGTCAAGCCGCTCACCCCGC    640
                     |..||.|.|||..|.||||| |..||.| ||||||||||||||||.||.|
BL03772___dpp    592 ATGGCATATGCGATTCAAAACCGCGGTC-AAGTCAAGCCGCTCACACCTC    640

BSNT_02181___    641 CTGACAGGCCGGTTCTGAGCATTGAATTCGCCAATTATGGCCAAGCAGAA    690
                     |.|||||||||||.|||.|.||.|||||.||||||||.||||||||.||.
BL03772___dpp    641 CGGACAGGCCGGTGCTGCGGATAGAATTTGCCAATTACGGCCAAGCCGAG    690

BSNT_02181___    691 TGGGCGAATCTGATGCCGGGAACGGAAATCAAGACGGGAACTACAACCGT    740
                     |||||.|.||||||||||||..|.||||||.|..||..|||.||.||.||
BL03772___dpp    691 TGGGCCAGTCTGATGCCGGGTGCTGAAATCGAACCGCAAACGACGACTGT    740

BSNT_02181___    741 TCAATTTCAGGCGAAGGACATGCTTGAAGCCTATCAGGCGATGCTTGTCA    790
                     .|..|.|||.|||||.|||||.||||||||||||||.|||||||||||||
BL03772___dpp    741 CCGCTATCAAGCGAAAGACATTCTTGAAGCCTATCAAGCGATGCTTGTCA    790

BSNT_02181___    791 TGACTGAGCTTGCGATGCGGACATCATTCTGCTAA    825
                     ||||.||||||||||||.|.||..||||||.|||.
BL03772___dpp    791 TGACCGAGCTTGCGATGAGAACGACATTCTCCTAG    825


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02181 and BL03772

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
