Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02187 and BL03766

See DNA alignment / Visit BSNT_02187 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_02187.1.5803.seq
#    -bsequence pep-align/BL03766___ykfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02187-BL03766___ykfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02187-BL03766___ykfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02187
# 2: BL03766___ykfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity:     219/313 (70.0%)
# Similarity:   262/313 (83.7%)
# Gaps:           6/313 ( 1.9%)
# Score: 1197.0
# 
#
#=======================================

BSNT_02187         1 MNYKPKALKKGDTVGVIAPASPPDQKKLDTALLFLEELGLQVKLGKALKN     50
                     ||..|:.|.||||||||||||||..:|||.|:.||:||||:||:|::...
BL03766___ykf      1 MNIAPQRLMKGDTVGVIAPASPPVPEKLDRAVRFLKELGLEVKVGRSAAE     50

BSNT_02187        51 QHGYLAGQDDERLADLHEMFRDEEVKAVLCACGGFGTGRIAAGIDFSLIR    100
                     :||||||.|:|||.|||:||.|..||||:|||||:||.|||..||:.||:
BL03766___ykf     51 RHGYLAGSDEERLGDLHDMFEDRSVKAVICACGGYGTARIAGKIDYRLIK    100

BSNT_02187       101 KHPKIFWGYSDITFLHTAIHQNTGLVTFHGPMLSSDIGLDDVHPLTKASY    150
                     ..|||||||||||||||||.|||||:||||||||||||.|||||||:.|:
BL03766___ykf    101 SRPKIFWGYSDITFLHTAIRQNTGLITFHGPMLSSDIGKDDVHPLTRRSF    150

BSNT_02187       151 KQLFQETEFTYTEELSPLTALVPGKAEGELVGGNLSLLTSTLGTPFEIDT    200
                     :||||:...:||||||||..||.|.||||||||||:||.:|||||:||||
BL03766___ykf    151 QQLFQKMTLSYTEELSPLETLVHGAAEGELVGGNLALLVTTLGTPYEIDT    200

BSNT_02187       201 RGKLLFIEDIDEEPYQIDRMLNQLKMAGKLTDAAGILVCDFHNCVPVKRE    250
                     :||||||||:|||||:||||||||||||||:||||||:||||||:|.||:
BL03766___ykf    201 KGKLLFIEDVDEEPYRIDRMLNQLKMAGKLSDAAGILLCDFHNCIPKKRD    250

BSNT_02187       251 KSLSLEQVLEDYIISAGRPALRGFKIGHCSPSIAVPIGAKAAMNTAEKTV    300
                     |||:|::|.:|||.|.|:|||.|||||||||:||||:|.||.::..:|.:
BL03766___ykf    251 KSLTLKEVFQDYIASEGKPALSGFKIGHCSPNIAVPVGVKAVLDAGKKRL    300

BSNT_02187       301 VIEAGVSEGALKT    313
                     .||.|:|      
BL03766___ykf    301 TIEPGIS------    307


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