Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02188 and BL03765
See
DNA alignment /
Visit
BSNT_02188 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_02188___ykfB.1.5803.seq
# -bsequence pep-align/BL03765___ykfB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02188___ykfB-BL03765___ykfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02188___ykfB-BL03765___ykfB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02188___ykfB
# 2: BL03765___ykfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 252/365 (69.0%)
# Similarity: 297/365 (81.4%)
# Gaps: 6/365 ( 1.6%)
# Score: 1299.0
#
#
#=======================================
BSNT_02188___ 1 MKIIRIETSRIAIPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPP 50
|||..|.|:|||:||.||||||||||.|||:|||::|.::|..|||||||
BL03765___ykf 1 MKIAEITTNRIAVPLKKPFKTALRTVRTAEAVIVKVTAENGMTGWGEAPP 50
BSNT_02188___ 51 TLVITGDSMDSIESAIHNVLKPALLGKSLAGYEAILHDIQHLLTGNMSAK 100
|.||||:::||||.|::.:|.|||.|.:|...|||.|||..|:.||.|||
BL03765___ykf 51 TAVITGETLDSIEGAVNTILAPALTGCNLRMAEAIFHDIDKLIVGNTSAK 100
BSNT_02188___ 101 AAVEMALYDGWAQMCGLPLYQMLGGYRDTLETDYTVSVNSPEEMAADAEN 150
||||.|:||..||:|||||||:|||||..:|||:|||||.||||..||..
BL03765___ykf 101 AAVETAVYDCLAQLCGLPLYQLLGGYRREIETDFTVSVNDPEEMGKDAAR 150
BSNT_02188___ 151 YLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKE 200
|:::||:||||||||:|:|||:.||:||||:.|.||::|:||||||..|:
BL03765___ykf 151 YVQEGFRTLKIKVGKNDMATDLERIREIRKQAGPAVRIRVDANQGWTAKQ 200
BSNT_02188___ 201 AVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTP 250
||.|||||||.||.|||||||||:.||.|||:||||.|||||||||||||
BL03765___ykf 201 AVKAIRKMEDEGLSIELVEQPVHRLDLEGLKQVTDAVDTPIMADESVFTP 250
BSNT_02188___ 251 RQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIET 300
|.||.||:|||||||||||||||||..|.||||||||||||||.||||||
BL03765___ykf 251 RDAFHVLKTRSADLINIKLMKAGGIRQALKINAMAEACGVECMAGSMIET 300
BSNT_02188___ 301 KLGITAAAHFAASKRNITRFDFDAPLMLKTDVFKGGITYSGSTISMPGKP 350
:||||||.|||||::|:|:||||||||||.|:.:|||.|...||::|..|
BL03765___ykf 301 RLGITAAVHFAASQKNVTKFDFDAPLMLKEDIVEGGIRYHAGTITIPDAP 350
BSNT_02188___ 351 GLGITGTAL------ 359
|||||....
BL03765___ykf 351 GLGITKVCHEGGEDK 365
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.