Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02190 and BL03763
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_02190___ykfD.1.5803.seq
# -bsequence pep-align/BL03763___ykfD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02190___ykfD-BL03763___ykfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02190___ykfD-BL03763___ykfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02190___ykfD
# 2: BL03763___ykfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity: 255/337 (75.7%)
# Similarity: 285/337 (84.6%)
# Gaps: 8/337 ( 2.4%)
# Score: 1341.0
#
#
#=======================================
BSNT_02190___ 1 MTPLPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGK 50
|....||:||:||||||||:.:|||||||::|.|:|||||||||||||||
BL03763___ykf 1 MQTGALLKVSRLKMHFDAGRGKTVKAVDGISFDIKEGETFGLVGESGCGK 50
BSNT_02190___ 51 STLGRVLMRLYQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYAS 100
||.|||||||||||||.|||||.|:|.||:.|.|.:|||:||||||||||
BL03763___ykf 51 STSGRVLMRLYQPTEGEVTYRGKNIHHLSDDESFQYNRKIQMIFQDPYAS 100
BSNT_02190___ 101 LNPRMTVREIILEPMEIHNLYNTHKARLLVVDELLEAVGLHPDFGSRYPH 150
||||:|||||:.||||||.||...||||...||||||||||..|.:||||
BL03763___ykf 101 LNPRLTVREIMTEPMEIHGLYGGKKARLEKADELLEAVGLHKSFANRYPH 150
BSNT_02190___ 151 EFSGGQRQRIGIARALSLNPEFIVADEPISALDVSVQAQVVNLLKRLQKE 200
||||||||||||||||:|.||||||||||||||||||||||||||:||||
BL03763___ykf 151 EFSGGQRQRIGIARALALEPEFIVADEPISALDVSVQAQVVNLLKKLQKE 200
BSNT_02190___ 201 KGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLYREPLHPYTKA 250
||||||||||||||||||||||||||||||:|||:||.||:|||||||:|
BL03763___ykf 201 KGLTFLFIAHDLSMVKHISDRIGVMYLGHMVEITDSGRLYQEPLHPYTQA 250
BSNT_02190___ 251 LLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRCPEAMPECGE 300
|||:||||||::||||.||:||||||||::||||||||||||.||..|..
BL03763___ykf 251 LLSAIPIPDPDVEDKRRRIILKGELPSPIDPPSGCVFRTRCPAAMDICAA 300
BSNT_02190___ 301 SRPQLQEIEPGRFVACHLYRNAETKEKVR-------- 329
.:|.|:|.:.|.|||||||.....||:..
BL03763___ykf 301 KKPMLKEADDGHFVACHLYDGDARKEEAGLKVTLQAR 337
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