Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02190 and BL03763

See DNA alignment / Visit BSNT_02190 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_02190___ykfD.1.5803.seq
#    -bsequence pep-align/BL03763___ykfD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02190___ykfD-BL03763___ykfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02190___ykfD-BL03763___ykfD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02190___ykfD
# 2: BL03763___ykfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     255/337 (75.7%)
# Similarity:   285/337 (84.6%)
# Gaps:           8/337 ( 2.4%)
# Score: 1341.0
# 
#
#=======================================

BSNT_02190___      1 MTPLPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGK     50
                     |....||:||:||||||||:.:|||||||::|.|:|||||||||||||||
BL03763___ykf      1 MQTGALLKVSRLKMHFDAGRGKTVKAVDGISFDIKEGETFGLVGESGCGK     50

BSNT_02190___     51 STLGRVLMRLYQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYAS    100
                     ||.|||||||||||||.|||||.|:|.||:.|.|.:|||:||||||||||
BL03763___ykf     51 STSGRVLMRLYQPTEGEVTYRGKNIHHLSDDESFQYNRKIQMIFQDPYAS    100

BSNT_02190___    101 LNPRMTVREIILEPMEIHNLYNTHKARLLVVDELLEAVGLHPDFGSRYPH    150
                     ||||:|||||:.||||||.||...||||...||||||||||..|.:||||
BL03763___ykf    101 LNPRLTVREIMTEPMEIHGLYGGKKARLEKADELLEAVGLHKSFANRYPH    150

BSNT_02190___    151 EFSGGQRQRIGIARALSLNPEFIVADEPISALDVSVQAQVVNLLKRLQKE    200
                     ||||||||||||||||:|.||||||||||||||||||||||||||:||||
BL03763___ykf    151 EFSGGQRQRIGIARALALEPEFIVADEPISALDVSVQAQVVNLLKKLQKE    200

BSNT_02190___    201 KGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLYREPLHPYTKA    250
                     ||||||||||||||||||||||||||||||:|||:||.||:|||||||:|
BL03763___ykf    201 KGLTFLFIAHDLSMVKHISDRIGVMYLGHMVEITDSGRLYQEPLHPYTQA    250

BSNT_02190___    251 LLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRCPEAMPECGE    300
                     |||:||||||::||||.||:||||||||::||||||||||||.||..|..
BL03763___ykf    251 LLSAIPIPDPDVEDKRRRIILKGELPSPIDPPSGCVFRTRCPAAMDICAA    300

BSNT_02190___    301 SRPQLQEIEPGRFVACHLYRNAETKEKVR--------    329
                     .:|.|:|.:.|.|||||||.....||:..        
BL03763___ykf    301 KKPMLKEADDGHFVACHLYDGDARKEEAGLKVTLQAR    337


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.