Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02195 and BL03762

See DNA alignment / Visit BSNT_02195 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_02195___ykhA.1.5803.seq
#    -bsequence pep-align/BL03762___ykhA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02195___ykhA-BL03762___ykhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02195___ykhA-BL03762___ykhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02195___ykhA
# 2: BL03762___ykhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     142/172 (82.6%)
# Similarity:   154/172 (89.5%)
# Gaps:           0/172 ( 0.0%)
# Score: 730.0
# 
#
#=======================================

BSNT_02195___      1 METPETRFCKESKVVKTSRVFPLDTNNHNTLFGGKLMSYIDDIASISAAR     50
                     |..||.|:||||||||||||||||||||||||||||||||||||||||||
BL03762___ykh      1 MNGPEKRYCKESKVVKTSRVFPLDTNNHNTLFGGKLMSYIDDIASISAAR     50

BSNT_02195___     51 HCRRETVTASMDSVDFLKPIGQKDSVCLESYVTWVGTSSMEVFVKVIKEH    100
                     |.|.|||||||||||||:||.|:|||||||||||||.:||||||||||||
BL03762___ykh     51 HSRCETVTASMDSVDFLEPIRQEDSVCLESYVTWVGRTSMEVFVKVIKEH    100

BSNT_02195___    101 LMTGERELAATSFLTFVALDSNGKPVPVPRVVPETEEEIMLHNTAVQRAN    150
                     |:||||:|||||||||||||.:|.|..||:|||::|||||||.||.|||.
BL03762___ykh    101 LLTGERKLAATSFLTFVALDQDGNPQAVPQVVPQSEEEIMLHETARQRAE    150

BSNT_02195___    151 ERKNRKKHSQALANALGTDKPW    172
                     ||||.:|||:|||.||..||||
BL03762___ykh    151 ERKNHRKHSKALAQALAVDKPW    172


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