Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02199 and BL03756
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence pep-align/BSNT_02199___ykkA.1.5803.seq
# -bsequence pep-align/BL03756___ykkA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02199___ykkA-BL03756___ykkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02199___ykkA-BL03756___ykkA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02199___ykkA
# 2: BL03756___ykkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 91/178 (51.1%)
# Similarity: 120/178 (67.4%)
# Gaps: 8/178 ( 4.5%)
# Score: 466.0
#
#
#=======================================
BSNT_02199___ 1 ---MKDLSIRNDMAPTVSLLYSAVEENSLRLASIVSHMTHSELYYKGRCQ 47
:||||...:|||||.||:|||.||..||.||||.::..||.|||...
BL03756___ykk 1 MPFLKDLSPDEEMAPTVGLLFSAVNENIERLKSIVSGISREELEYKGEHG 50
BSNT_02199___ 48 TKNSTAQLLHHITNVDIRWVWRIKENRIPNHIEQTYGPMTDESGRLPVPV 97
.|||.|||::|:.|||:|||:|:||:.||..:|:.|||||||:||||...
BL03756___ykk 51 DKNSIAQLIYHLINVDVRWVYRLKESEIPRELEEKYGPMTDENGRLPEVT 100
BSNT_02199___ 98 NQPDLDELLKRHQHVVEELKSVCFTLTENALNQPLSFEGDTATIRWGIWH 147
..| |..|::.|:.|:|.||......:|..|.:.:.:||..:||||||||
BL03756___ykk 101 GVP-LTVLIEWHEEVLEMLKHTAKGFSEKDLLKKVPYEGGFSTIRWGIWH 149
BSNT_02199___ 148 MADHNRYHQAHIEALKKEWKQDVAKYER 175
|:||||||||||:|..||::...:
BL03756___ykk 150 MSDHNRYHQAHIQACLKEFRMQNS---- 173
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