Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02203 and BL03754

See DNA alignment / Visit BSNT_02203 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_02203___ykkD.1.5803.seq
#    -bsequence pep-align/BL03754___ykkD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02203___ykkD-BL03754___ykkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02203___ykkD-BL03754___ykkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02203___ykkD
# 2: BL03754___ykkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 105
# Identity:      76/105 (72.4%)
# Similarity:    88/105 (83.8%)
# Gaps:           1/105 ( 1.0%)
# Score: 398.0
# 
#
#=======================================

BSNT_02203___      1 MLHWISLLCAGCLEMAGVALMNQYAKEKSVKWVLLIIVGFAASFSLLSYA     50
                      :.||.|:.||.|||.||.:|||:.|:|.|:|:.|:|:||||||.|||.|
BL03754___ykk      1 -MEWICLIAAGILEMLGVTMMNQFHKDKRVRWIFLLIIGFAASFFLLSLA     49

BSNT_02203___     51 METIPMGTAYAVWTGIGTAGGALVGILFYKEQKDAKRIFFIALILCSAVG    100
                     |||:||||||||||||||.||||||||||.|.||.||||||||||.||||
BL03754___ykk     50 METLPMGTAYAVWTGIGTVGGALVGILFYGEPKDGKRIFFIALILGSAVG     99

BSNT_02203___    101 LKILS    105
                     ||::|
BL03754___ykk    100 LKLIS    104


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