Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02115 and BL03749
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence pep-align/BSNT_02115___xkdA.1.5803.seq
# -bsequence pep-align/BL03749___xkdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02115___xkdA-BL03749___xkdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02115___xkdA-BL03749___xkdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02115___xkdA
# 2: BL03749___xkdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 115/218 (52.8%)
# Similarity: 148/218 (67.9%)
# Gaps: 20/218 ( 9.2%)
# Score: 602.0
#
#
#=======================================
BSNT_02115___ 1 MGDYLSHLEEYVKNLYGRLGITSPHHIDMLKIAKDLDIWVHFEDMGSMMV 50
|..|||||||||||:|.:.|...||.|||.:||...:||:|:|::.|||:
BL03749___xkd 1 MKFYLSHLEEYVKNMYQKFGFFEPHQIDMNRIAAHFNIWIHYENVNSMMI 50
BSNT_02115___ 51 KYDGMYSIVLNQKKSREEQWEDFGHELCHVLKHAGNHFQMNKLFRELQEF 100
|:||||||:||...|:|:|||||.||||||||||||...||::|||||||
BL03749___xkd 51 KHDGMYSIILNSSLSKEKQWEDFAHELCHVLKHAGNQLYMNQMFRELQEF 100
BSNT_02115___ 101 QANQFMYHFCVPTFMLLQMELPQWRSQALATIAAVFRVTKEFADKRLDMF 150
|||||||||||||||||:|:.||.|.||...||.:|:||:.||.||:::|
BL03749___xkd 101 QANQFMYHFCVPTFMLLKMDFPQLRCQAAKMIADLFKVTESFAVKRIELF 150
BSNT_02115___ 151 ERRKAGIQFQKRLAYLLSHKRPNA----YEEGDQQHLQVAEEKALY---- 192
|:|:|||||.:.....||.:..:| :||.|:......|.:..|
BL03749___xkd 151 EKRQAGIQFHEAWMASLSQESESANAPRFEEVDELARYRRETRRPYAAAN 200
BSNT_02115___ 193 HIGKNI------------ 198
.:||.:
BL03749___xkd 201 GLGKMVAAESRPAYMLRK 218
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