Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02172 and BL03745
See
DNA alignment /
Visit
BSNT_02172 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_02172___pit.1.5803.seq
# -bsequence pep-align/BL03745___pit.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02172___pit-BL03745___pit.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02172___pit-BL03745___pit.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02172___pit
# 2: BL03745___pit
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 287/333 (86.2%)
# Similarity: 309/333 (92.8%)
# Gaps: 1/333 ( 0.3%)
# Score: 1469.0
#
#
#=======================================
BSNT_02172___ 1 MDILLILTILIVICALAFDFINGFHDTANAIATSVSTKALKPRHAIILAA 50
||:|.:|||||||.|||||||||||||||||||||||||||||||||:||
BL03745___pit 1 MDLLFVLTILIVIFALAFDFINGFHDTANAIATSVSTKALKPRHAIIMAA 50
BSNT_02172___ 51 VMNFIGAMTFTGVAKTITKDIVDPYTLENGSVVILAALLAAIAWNLITWY 100
||||.|||||||||||||.||.||:.||||||||||||:|.|.|||:|||
BL03745___pit 51 VMNFAGAMTFTGVAKTITSDIADPFKLENGSVVILAALIAGITWNLVTWY 100
BSNT_02172___ 101 YGIPSSSSHAIIGAIAGAAIAAAGFAALNYKGFIKIIEALILSPIIAFVL 150
:|||||||||||||||||.||:.||||:.|.||||||||||||||:||||
BL03745___pit 101 FGIPSSSSHAIIGAIAGAVIASEGFAAIKYHGFIKIIEALILSPILAFVL 150
BSNT_02172___ 151 GFILYSIVKLIFKDSNLAKTNKQFRRVQIVTAALQSYTHGTNDAQKAMGI 200
|:::|||||:|||:||||||||:||||||.|||:||||||||||||||||
BL03745___pit 151 GYLIYSIVKVIFKNSNLAKTNKRFRRVQIATAAIQSYTHGTNDAQKAMGI 200
BSNT_02172___ 201 ITMALITANLHTSANDIPTWVQFACATAMGLGTSIGGWKIIKTVGGKIMK 250
||||||..||| |..|||.|||||||.|||||||:|||||||||||||||
BL03745___pit 201 ITMALIAGNLH-STTDIPFWVQFACAMAMGLGTSVGGWKIIKTVGGKIMK 249
BSNT_02172___ 251 IRPVNGVSADLTGAAIIFGATFIHLPVSTTHVISSSILGVGASHRVKGVN 300
||||||||||||||.||||||.:|||||||||||||||||||||||||||
BL03745___pit 250 IRPVNGVSADLTGALIIFGATIVHLPVSTTHVISSSILGVGASHRVKGVN 299
BSNT_02172___ 301 WGTAKRMLITWVITLPISATLGAIAYFILNMIF 333
||||||||||||||||||||:||.|||||::.|
BL03745___pit 300 WGTAKRMLITWVITLPISATIGAFAYFILDLFF 332
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.