Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02172 and BL03745
See
Amino acid alignment /
Visit
BSNT_02172 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_02172___pit.1.5803.seq
# -bsequence dna-align/BL03745___pit.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02172___pit-BL03745___pit.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02172___pit-BL03745___pit.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02172___pit
# 2: BL03745___pit
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1006
# Identity: 762/1006 (75.7%)
# Similarity: 762/1006 (75.7%)
# Gaps: 11/1006 ( 1.1%)
# Score: 2815.5
#
#
#=======================================
BSNT_02172___ 1 ATGGATATTCTATTAATATTAACGATACTAATAGTCATTTGTGCTCTGGC 50
||||||.||.||||..|||||||.|||.|.||.|||||.|.||||.||||
BL03745___pit 1 ATGGATCTTTTATTTGTATTAACCATATTGATTGTCATCTTTGCTTTGGC 50
BSNT_02172___ 51 GTTTGATTTCATCAACGGGTTTCATGATACGGCAAACGCAATTGCGACTT 100
.|||||.||.||||||||.|||||||||||||||||.||.||.||.||.|
BL03745___pit 51 ATTTGACTTTATCAACGGCTTTCATGATACGGCAAATGCGATCGCCACCT 100
BSNT_02172___ 101 CAGTATCAACAAAAGCGTTGAAACCGCGCCATGCCATTATATTGGCGGCT 150
|.|||||.|||||||||||.|||||..|.|||||||||||..||||.|||
BL03745___pit 101 CGGTATCGACAAAAGCGTTAAAACCAAGGCATGCCATTATTATGGCCGCT 150
BSNT_02172___ 151 GTGATGAACTTTATCGGAGCAATGACGTTTACGGGTGTTGCCAAAACCAT 200
||.||||||||...|||.||.||||||||.||.||.||.||||||||.||
BL03745___pit 151 GTCATGAACTTCGCCGGCGCCATGACGTTCACAGGCGTAGCCAAAACAAT 200
BSNT_02172___ 201 TACGAAAGACATCGTAGATCCTTATACGCTGGAAAATGGCTCTGTTGTCA 250
|||.|..|||||||..||.||||..|.|||.|||||.||.||.||.||.|
BL03745___pit 201 TACAAGCGACATCGCCGACCCTTTCAAGCTTGAAAACGGATCGGTCGTGA 250
BSNT_02172___ 251 TTTTGGCTGCGCTACTCGCTGCAATTGCCTGGAACCTTATCACATGGTAC 300
|..|.||.||.||..||||.|..|||.|.||||||||..|.||.|||||.
BL03745___pit 251 TCCTTGCCGCTCTTATCGCCGGCATTACATGGAACCTAGTGACCTGGTAT 300
BSNT_02172___ 301 TACGGTATCCCAAGCAGCTCATCCCATGCCATCATCGGCGCTATTGCCGG 350
|.|||.||.||.|||||||||||||||||.||||||||.||.||||||||
BL03745___pit 301 TTCGGGATTCCCAGCAGCTCATCCCATGCGATCATCGGAGCGATTGCCGG 350
BSNT_02172___ 351 TGCAGCCATTGCGGCAGCCGGATTTGCAGCG-TTAAACTATAAGGGCTTC 399
.||.|.|||.||..|.|..||||||||.||| ||||| ||..|.||.||.
BL03745___pit 351 AGCTGTCATCGCATCGGAAGGATTTGCCGCGATTAAA-TACCACGGATTT 399
BSNT_02172___ 400 ATTAAAATCATTGAAGCACTGATCCTATCACCAATTATTGCCTTTGTCCT 449
||||||||.|||||||||||.||..||||.||.|||.|.||.|||||..|
BL03745___pit 400 ATTAAAATTATTGAAGCACTTATATTATCGCCCATTTTGGCGTTTGTTTT 449
BSNT_02172___ 450 TGGTTTTATTCTTTATAGCATCGTTAAGCTGATTTTCAAAGACAGCAACT 499
.||.|.|.|..|.||.||||||||.||..|.|||||.||..|||||||..
BL03745___pit 450 AGGATATTTGATCTACAGCATCGTCAAAGTCATTTTTAAGAACAGCAATC 499
BSNT_02172___ 500 TGGCGAAAACGAATAAGCAATTCCGCAGAGTGCAGATTGTAACAGCTGCC 549
||||.|||||||||||||..||.||..|.||.||.||.|..|||||||||
BL03745___pit 500 TGGCAAAAACGAATAAGCGGTTTCGGCGCGTTCAAATCGCGACAGCTGCC 549
BSNT_02172___ 550 CTGCAATCGTATACACACGGAACAAACGATGCGCAAAAAGCAATGGGAAT 599
.|.||.||.|||||.|||||.||.||||||||.||.|||||.|||||.||
BL03745___pit 550 ATTCAGTCCTATACGCACGGCACGAACGATGCACAGAAAGCGATGGGTAT 599
BSNT_02172___ 600 TATCACAATGGCTCTCATCACAGCGAATTTACATACTTCTGCTAA-TGAT 648
.||.||.||||||.|.|||.|.|..||.||.||.|.|.| || .||.
BL03745___pit 600 CATTACGATGGCTTTAATCGCGGGTAACTTGCACAGTAC----AACCGAC 645
BSNT_02172___ 649 ATTCCTACCTGGGTGCAATTCGCCTGCGCGACAGCCATGGGTCTCGGAAC 698
||.||...|||||||||.||.||.|||||.|..||||||||.||||||||
BL03745___pit 646 ATCCCGTTCTGGGTGCAGTTTGCATGCGCCATGGCCATGGGACTCGGAAC 695
BSNT_02172___ 699 ATCAATCGGCGGCTGGAAAATCATCAAAACCGTTGGCGGAAAGATCATGA 748
|||..||||||||||||||||||||||||||||.||||||||.|||||||
BL03745___pit 696 ATCTGTCGGCGGCTGGAAAATCATCAAAACCGTCGGCGGAAAAATCATGA 745
BSNT_02172___ 749 AAATCCGCCCGGTAAACGGTGTTTCCGCTGACTTAACCGGAGCAGCCATT 798
|.|||||.||.||.||||||||.||.||.||.||.||.|||||...|||.
BL03745___pit 746 AGATCCGTCCCGTCAACGGTGTCTCTGCAGATTTGACGGGAGCCCTCATC 795
BSNT_02172___ 799 ATTTTCGGCGCCACGTTTATTCATTTGCCGGTCAGTACAACCCACGTCAT 848
||.||.|||||.|||.|..|.||||||||.|||||.||.||.||||||||
BL03745___pit 796 ATCTTTGGCGCGACGATCGTCCATTTGCCTGTCAGCACGACACACGTCAT 845
BSNT_02172___ 849 TTCTTCATCAATTCTTGGCGTCGGTGCGTCCCACCGCGTAAAAGGCGTAA 898
|||||||||.|||.|.|||||.||.||.||||||||.||.||||||||||
BL03745___pit 846 TTCTTCATCCATTTTAGGCGTGGGCGCTTCCCACCGGGTGAAAGGCGTAA 895
BSNT_02172___ 899 ACTGGGGTACGGCCAAGCGAATGCTCATTACATGGGTCATCACGCTTCCG 948
|||||||.||.||.|||||.|||||.||.||.||||||||.||.|||||.
BL03745___pit 896 ACTGGGGCACCGCAAAGCGGATGCTGATCACTTGGGTCATTACCCTTCCC 945
BSNT_02172___ 949 ATTTCAGCGACACTTGGTGCCATCGCCTACTT--TATTTTAAATATGATA 996
|||||.||.||..|.|||||..|.|||||.|| ||.||.|..||| |.
BL03745___pit 946 ATTTCGGCAACCATCGGTGCATTTGCCTATTTCATACTTGATTTAT--TC 993
BSNT_02172___ 997 TTTTAA 1002
||||||
BL03745___pit 994 TTTTAA 999
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.