Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02174 and BL03743
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_02174___ykbA.1.5803.seq
# -bsequence pep-align/BL03743___ykbA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02174___ykbA-BL03743___ykbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02174___ykbA-BL03743___ykbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02174___ykbA
# 2: BL03743___ykbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 442
# Identity: 342/442 (77.4%)
# Similarity: 396/442 (89.6%)
# Gaps: 4/442 ( 0.9%)
# Score: 1822.0
#
#
#=======================================
BSNT_02174___ 1 MHSEDNGLKKEIGLLFALTLVIGTIIGSGVFMKPGAVLAYSGDSKMALFA 50
|::|.|||||||||||||:||||||||||||||||:||:|||::::||||
BL03743___ykb 1 MNAEANGLKKEIGLLFALSLVIGTIIGSGVFMKPGSVLSYSGNAQIALFA 50
BSNT_02174___ 51 WLLGGILTLAGGLTIAEIGTQIPKTGGLYTYLEEVYGEFWGFLCGWVQII 100
|||||||||||||||||:|.||||||||||||||:|||||||||||||||
BL03743___ykb 51 WLLGGILTLAGGLTIAELGAQIPKTGGLYTYLEEIYGEFWGFLCGWVQII 100
BSNT_02174___ 101 IYGPAIIGALGLYFGSLMANLFGWGSGLSKVIGIIAVLFLCVINIIGTKY 150
|||||||||||||||||:||||.|....:.:||||.|.|||::||:||||
BL03743___ykb 101 IYGPAIIGALGLYFGSLVANLFSWDKSWTALIGIITVAFLCIVNIVGTKY 150
BSNT_02174___ 151 GGFVQTLTTIGKLIPIACIIIFGLWKGDQHIFTAVNESISDMNFGAAILA 200
||.|||:|||||||||.|||:||||:||::||::|.|||:..|||||:||
BL03743___ykb 151 GGAVQTITTIGKLIPIVCIIVFGLWQGDEYIFSSVTESIASQNFGAAVLA 200
BSNT_02174___ 201 TLFAYDGWILLAALGGEMKNPEKLLPRAMTGGLLIVTAIYIFINFALLHI 250
|||||||||||||||||||||||:||:|||||:|||||.|:|||.|||||
BL03743___ykb 201 TLFAYDGWILLAALGGEMKNPEKVLPKAMTGGILIVTACYLFINLALLHI 250
BSNT_02174___ 251 LSANEIVTLGENATSTAATMLFGSIGGKLISVGIIVSIFGCLNGKVLSFP 300
|.|::||.|||||||||||||||.:||||||:||||||||||||||||||
BL03743___ykb 251 LPADQIVKLGENATSTAATMLFGPLGGKLISIGIIVSIFGCLNGKVLSFP 300
BSNT_02174___ 301 RVSFAMAERKQLPFAEKLSHVHPSFRTPWIAISFQIALALIMMLISNPDK 350
||.|||||:|||||:..:|||||:|.|||||:..|:.:|:|:|:||||:|
BL03743___ykb 301 RVIFAMAEKKQLPFSRWISHVHPAFHTPWIAVIVQMIIAVILMIISNPEK 350
BSNT_02174___ 351 LSEISIFMIYIFYVMAFFAVFILRKRAKGKKRAYSVPLYPFMPILAIAGS 400
|||:||||||||||||||||||||:|..|:.|:|||||||::|:.||.||
BL03743___ykb 351 LSEVSIFMIYIFYVMAFFAVFILRRRKNGQGRSYSVPLYPYLPVAAILGS 400
BSNT_02174___ 401 FFVLGSTLITDTMSCGLSILIGLAGLPVYYGMKKRKAS---- 438
.|||.||||||..||..||||||.|||||:.||||..:
BL03743___ykb 401 LFVLVSTLITDFYSCLWSILIGLVGLPVYFWMKKRNKNGSAA 442
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