Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02193 and BL03741

See DNA alignment / Visit BSNT_02193 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence pep-align/BSNT_02193.1.5803.seq
#    -bsequence pep-align/BL03741___ykgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02193-BL03741___ykgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02193-BL03741___ykgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02193
# 2: BL03741___ykgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:      95/295 (32.2%)
# Similarity:   120/295 (40.7%)
# Gaps:         138/295 (46.8%)
# Score: 512.0
# 
#
#=======================================

BSNT_02193         0 --------------------------------------------------      0
                                                                       
BL03741___ykg      1 MDSALSKKNRGAGCTSEYDVLKKVVLCRPEYMEIAEVINETQKYFQKDNI     50

BSNT_02193         0 --------------------------------------------------      0
                                                                       
BL03741___ykg     51 DKTLAVRQHNTLIKELESRGIEVVILPALSQFPEQVFTRDIGFTIGGTVF    100

BSNT_02193         1 ------------------------------MLDTSIEGGDVIIDDDIVYV     20
                                                   .....|||||:::|.:.:|.
BL03741___ykg    101 SAQLSADIRQGEENVLQEWLAKEQISWTAFNEGYQIEGGDILVDQNTIYA    150

BSNT_02193        21 GISQRTVISAIGQLEEALPEYTIVPVKLHEKFLHLDCVFNIVSESEALIY     70
                     |||.||..||:.:|:..||.|.::||...|.||||||||||:|.:|||:|
BL03741___ykg    151 GISHRTTFSAVQELKRRLPSYEVIPVPFEETFLHLDCVFNILSPTEALVY    200

BSNT_02193        71 PQAIEPDAADMLAKRYDLIEVPEDEQFTLGTNVLSIEKKTIISLPGNRHV    120
                     |:|:.....|:|.|||::||:.:||||.||||||||..||:||||.||||
BL03741___ykg    201 PKALGEREYDVLKKRYEMIEITDDEQFQLGTNVLSIGNKTVISLPVNRHV    250

BSNT_02193       121 NQQLSKRGYHIIEIDLSEIIKSGGSFRCCTMPLIRGE--------    157
                     ||:|.||||.:|||||||||||||||||||:|:.|..        
BL03741___ykg    251 NQELRKRGYTVIEIDLSEIIKSGGSFRCCTLPIERTSTECYKGGA    295


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