Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03724 and BL03728

See DNA alignment / Visit BSNT_03724 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_03724___yqzC.1.5803.seq
#    -bsequence pep-align/BL03728___yqzC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03724___yqzC-BL03728___yqzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03724___yqzC-BL03728___yqzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: BL03728___yqzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity:      78/159 (49.1%)
# Similarity:   108/159 (67.9%)
# Gaps:           5/159 ( 3.1%)
# Score: 376.0
# 
#
#=======================================

BSNT_03724___      1 MTKRGIQAFAGGIILATAVLAAVFYLTDEDQAAAVKDNKTVTEQDVNNYL     50
                     ||::.:||||||:||||||||..|||||..:|.|.|:.:.::|.||..||
BL03728___yqz      1 MTRQSVQAFAGGMILATAVLAGAFYLTDNGKAEASKEAQNISEADVKTYL     50

BSNT_03724___     51 DSKKMVSVNRDEYQKLLDSKEKSLTDDSSSDTKTD-----KVKTYKLKIK     95
                     ...:.||:.|:|||:||..||.:|..|::|..|.:     |...|||:||
BL03728___yqz     51 KDNQQVSLKREEYQQLLHYKETALKQDAASQNKKEQDDAKKGSKYKLEIK    100

BSNT_03724___     96 DGMSTADVSAILEKEGIISSAQDFNDYVIDAGYHKEIRAGEFKVKSDMSF    145
                     .|||||:::.:|.|..:||||.||.|||...|...:||||::::|...|.
BL03728___yqz    101 SGMSTAEIADLLAKGKVISSADDFKDYVKKTGNESKIRAGKYELKRGDSL    150

BSNT_03724___    146 KKIVKTLTR    154
                     |.|||||::
BL03728___yqz    151 KNIVKTLSK    159


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