Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03724 and BL03728
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03724___yqzC.1.5803.seq
# -bsequence dna-align/BL03728___yqzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03724___yqzC-BL03728___yqzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03724___yqzC-BL03728___yqzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03724___yqzC
# 2: BL03728___yqzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 529
# Identity: 308/529 (58.2%)
# Similarity: 308/529 (58.2%)
# Gaps: 113/529 (21.4%)
# Score: 795.0
#
#
#=======================================
BSNT_03724___ 1 ATGACAAAACGGGGCATTCAGGCATTTGCTGGCGGCATCATTTTAGCGAC 50
|||||.|.||...|..|.||.||||||||.||.||.||.|||||.||.||
BL03728___yqz 1 ATGACCAGACAAAGTGTACAAGCATTTGCCGGAGGAATGATTTTGGCTAC 50
BSNT_03724___ 51 AGCCGTTCTTGCAGCTGTTTTTTATCTGACTGA----CGAAGACCAGGCC 96
.|||||||||||||..|..||||||.||||.|| .||| |.||.
BL03728___yqz 51 CGCCGTTCTTGCAGGCGCATTTTATTTGACGGATAACGGAA----AAGCT 96
BSNT_03724___ 97 GCTGCTGTAAAAGATAAT-AAAACAGTAACTGAACAAGACGTGAACAATT 145
|..|||...||.||...| |||||| |.|..|||...||.||.|| .
BL03728___yqz 97 GAAGCTTCCAAGGAGGCTCAAAACA-TCAGCGAAGCCGATGTCAA----A 141
BSNT_03724___ 146 ACCTTGATTCTAAA--AAAAT-----GGTTTCTGTGAACCGTGATGAATA 188
|||| ||| |||| |.||| ||||||..||||.||.||.|||||
BL03728___yqz 142 ACCT--ATT-TAAAGGACAATCAGCAGGTTTCGCTGAAACGCGAGGAATA 188
BSNT_03724___ 189 TCAAAAACTTCTTGATTCAAAAGAGAAATCGTTGACCGATGACAGCAG-- 236
.|||.|.||.||..|.|..|||||||...||.||| |||||
BL03728___yqz 189 CCAACAGCTGCTCCACTATAAAGAGACCGCGCTGA--------AGCAGGA 230
BSNT_03724___ 237 --------CTCAGACACGAAAA----CAG----------ACAAAG--TCA 262
|||| |.||.|||| ||| |.|||| ||.
BL03728___yqz 231 TGCTGCGTCTCA-AAACAAAAAAGAGCAGGATGATGCGAAAAAAGGTTCC 279
BSNT_03724___ 263 AAACGTACAAGCTCAAAATTAAAGATGGCATGAGCACTGCGGATGTATCT 312
|| |||||||||..||||.|||...|||||||||||.||.||..||.|.
BL03728___yqz 280 AA--GTACAAGCTTGAAATCAAAAGCGGCATGAGCACGGCTGAGATAGCA 327
BSNT_03724___ 313 GCTATTCTTGAAAAAG----AGGGCATTATCTCTTCGGCTCAAGACTTTA 358
|...|.||||.||||| || |.||.|||||.||..|.|||||.|
BL03728___yqz 328 GACCTCCTTGCAAAAGGAAAAG----TAATTTCTTCCGCCGATGACTTCA 373
BSNT_03724___ 359 ATGACTATGTCATTGATGCCGG--------CTATCACAAAGAAATTCGTG 400
|.||.|||||.|...|..|||| ||| ||||.||.|
BL03728___yqz 374 AAGATTATGTGAAAAAGACCGGAAACGAATCTA--------AAATCCGCG 415
BSNT_03724___ 401 CCGGCGAGTTTAAAGTA--AAATCA--------GACATGAGTTTCAAAAA 440
|.|| |||| || ||.|.| ||| ||.||.|||||
BL03728___yqz 416 CAGG------TAAA-TACGAACTGAAGCGCGGTGAC---AGCTTGAAAAA 455
BSNT_03724___ 441 GATCGTAAAAACGTT----AACACGATAA 465
.|||||.||||||.| || ||||
BL03728___yqz 456 CATCGTCAAAACGCTGTCCAA----ATAA 480
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