Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03736 and BL03727

See DNA alignment / Visit BSNT_03736 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03736___yqgB.1.5803.seq
#    -bsequence pep-align/BL03727___yqgB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03736___yqgB-BL03727___yqgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03736___yqgB-BL03727___yqgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03736___yqgB
# 2: BL03727___yqgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     164/253 (64.8%)
# Similarity:   208/253 (82.2%)
# Gaps:           1/253 ( 0.4%)
# Score: 843.0
# 
#
#=======================================

BSNT_03736___      1 MNVFQLFIKSTYSPRDIAKTRFQGIGKAILYVFLLSVLFAIPTAYYVSTG     50
                     ||:||.|.||||||:.|.|.|||||||.|||||||||:.|:|..|::|:|
BL03727___yqg      1 MNLFQRFFKSTYSPQAIGKMRFQGIGKTILYVFLLSVIAALPNLYHISSG     50

BSNT_03736___     51 TVKSMNGFKTVLNKDFPDFTISNGKLQTDEKKATESQANGFVIVFDPTDS    100
                     .|.:||.|::.: |:||.|:|.:|.||||.|||.|||:.||||||||:.|
BL03727___yqg     51 VVNTMNSFQSAV-KEFPAFSIKDGTLQTDAKKAIESQSFGFVIVFDPSGS     99

BSNT_03736___    101 YGTEQIEAKQNAIGILQNKFVLAIDGQAQEMSYSMMPSELQKKDVIAGLN    150
                     |.|:|||.|:|::|||::|||:|||||.|||.|:|:|.::.|.|:::.::
BL03727___yqg    100 YETKQIEDKRNSVGILKDKFVIAIDGQVQEMPYTMLPEDMSKDDILSLVD    149

BSNT_03736___    151 QNKAMIVTVLSDLIFLVTAAGKFIEVSFLALIGLIIKNSQKKHLSYHQLW    200
                     ||||:||.||..|:||.|||||||:||.||:|||||:|.|||.|||.|||
BL03727___yqg    150 QNKAVIVPVLCVLLFLATAAGKFIDVSVLAVIGLIIRNGQKKMLSYKQLW    199

BSNT_03736___    201 KLSAYSITLSTVFFTIMRALEATVPSEFLLNWFVNFVILFLVLKEIPSKK    250
                     .:|||||||:||||.||.||||.|||:|||||||||::|||.:||.|:.|
BL03727___yqg    200 VMSAYSITLATVFFAIMDALEAVVPSQFLLNWFVNFIMLFLAIKETPASK    249

BSNT_03736___    251 AAV    253
                     ||.
BL03727___yqg    250 AAR    252


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.