Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03751 and BL03721

See DNA alignment / Visit BSNT_03751 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:47
# Commandline: needle
#    -asequence pep-align/BSNT_03751___ispH.1.5803.seq
#    -bsequence pep-align/BL03721___ispH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03751___ispH-BL03721___ispH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03751___ispH-BL03721___ispH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03751___ispH
# 2: BL03721___ispH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     284/314 (90.4%)
# Similarity:   299/314 (95.2%)
# Gaps:           0/314 ( 0.0%)
# Score: 1476.0
# 
#
#=======================================

BSNT_03751___      1 MDVIKISPRGYCYGVVDAMVIAKNASLDKSLPRPIYILGMIVHNKHVTDA     50
                     |:|||||||||||||||||||||||:||||||||||||||||||||||||
BL03721___isp      1 MNVIKISPRGYCYGVVDAMVIAKNAALDKSLPRPIYILGMIVHNKHVTDA     50

BSNT_03751___     51 FEEEGIFTLDGSNRLDILKQVDKGTVIFTAHGVSPEVRRIAEEKGLVAID    100
                     ||:|||:||||.|||:||.|||||||||||||||||||:|||:|||||||
BL03721___isp     51 FEKEGIYTLDGPNRLEILNQVDKGTVIFTAHGVSPEVRKIAEDKGLVAID    100

BSNT_03751___    101 ATCPDVTKTHNLILEMKEKGYHVIYIGKKGHPEPEGAVGVAPEIVHLVET    150
                     ||||||||||:||.:||.:|||||||||||||||||||||||:|||||||
BL03721___isp    101 ATCPDVTKTHDLIRKMKAEGYHVIYIGKKGHPEPEGAVGVAPDIVHLVET    150

BSNT_03751___    151 EEDVKNLDIQAEKLIVTNQTTMSQWDVHDIMELVKEKYPHVEYHQEICLA    200
                     ||||:.|||:||||||||||||||||||||||.||||||.||:|||||||
BL03721___isp    151 EEDVERLDIEAEKLIVTNQTTMSQWDVHDIMEKVKEKYPDVEFHQEICLA    200

BSNT_03751___    201 TQVRQEAVSEQAKKADLTIVVGDPKSNNSNRLAQVSEEIAGTKAYRIGDL    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03721___isp    201 TQVRQEAVSEQAKKADLTIVVGDPKSNNSNRLAQVSEEIAGTKAYRIGDL    250

BSNT_03751___    251 SELKLEWLKGVNTVAVTAGASTPTPITKEVIRFLEQFDHEDPSTWTTEHN    300
                     ||||||||.||.|||||||||||||||||||||||||||||||||...|.
BL03721___isp    251 SELKLEWLDGVETVAVTAGASTPTPITKEVIRFLEQFDHEDPSTWKISHE    300

BSNT_03751___    301 IPLKKILPKVKAKN    314
                     :||.|||||||||.
BL03721___isp    301 VPLHKILPKVKAKT    314


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.