Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03721 and BL03716

See DNA alignment / Visit BSNT_03721 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_03721.1.5803.seq
#    -bsequence pep-align/BL03716___yqgL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03721-BL03716___yqgL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03721-BL03716___yqgL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03721
# 2: BL03716___yqgL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:      60/166 (36.1%)
# Similarity:    82/166 (49.4%)
# Gaps:          33/166 (19.9%)
# Score: 248.5
# 
#
#=======================================

BSNT_03721         1 ---------------------------MIIQNAHTLTVSWEISEETMRLA     23
                                                :...:..|:.:||||||..:..|
BL03716___yqg      1 MKRTIIGKKPFQHSIRGDSSFCNDILKITSPDHETVRLSWEISEAALSAA     50

BSNT_03721        24 EAVLFEKTQDMIKELRIVIKRKDIEAVSTKRTTYDKGEWTIRQAAGDAVY     73
                     ||||||..:|:.|::.:...:....:..|..|...|||.::..|||:|.|
BL03716___yqg     51 EAVLFENIRDVEKQILLFCVKNGERSARTIHTGAFKGEASVFPAAGNAFY    100

BSNT_03721        74 RAEYRIVNSMNVSLKLAGTDDIYLDENGIRHINS--FQIEEAHTRWEEQF    121
                     :|||||.||:|:||.:..:|..||.|||| |.||  ||.::....|..||
BL03716___yqg    101 KAEYRIYNSLNMSLAVLSSDCFYLGENGI-HSNSSCFQHQDNQQDWTTQF    149

BSNT_03721       122 SAYTCYGRGE-KER--    134
                     ||||.|...| |||  
BL03716___yqg    150 SAYTRYSLIEGKERPR    165


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