Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03729 and BL03713

See DNA alignment / Visit BSNT_03729 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_03729___pstA.1.5803.seq
#    -bsequence pep-align/BL03713___pstA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03729___pstA-BL03713___pstA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03729___pstA-BL03713___pstA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03729___pstA
# 2: BL03713___pstA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     250/295 (84.7%)
# Similarity:   281/295 (95.3%)
# Gaps:           1/295 ( 0.3%)
# Score: 1318.0
# 
#
#=======================================

BSNT_03729___      1 MNRKITDKLATGMFGLCAAIIAAILVGLFSYIIINGVSQLSFQFITTKSS     50
                     ||.|:||:||||:|||.||:|||||||||:||||||||.:|..|:|::||
BL03713___pst      1 MNSKVTDRLATGVFGLIAAVIAAILVGLFAYIIINGVSHISLSFLTSRSS     50

BSNT_03729___     51 AIAAGGGIRDQLFNSFYILFITMLITIPLGVGGGVFMAEYAPNNKVTDFI    100
                     |:::|||||||||||||||.:|||||:|||||||::||||||.||:||||
BL03713___pst     51 ALSSGGGIRDQLFNSFYILVLTMLITVPLGVGGGIYMAEYAPANKLTDFI    100

BSNT_03729___    101 RTCIEVLSSLPSIVIGMFGLLMFVNLTGWGYTIIGGALALTVFNLPVMVR    150
                     |.||||||||||||:||||:|||||||||||:|||||||||:||||||||
BL03713___pst    101 RVCIEVLSSLPSIVMGMFGMLMFVNLTGWGYSIIGGALALTIFNLPVMVR    150

BSNT_03729___    151 VTEDAIRSVPKDLKEASLALGVSRWHTVKTVLIPSAIPSIITGAILASGR    200
                     |||||||||||:.||||||||||:|||:||||||.|:|||||||||||||
BL03713___pst    151 VTEDAIRSVPKEQKEASLALGVSKWHTIKTVLIPGAVPSIITGAILASGR    200

BSNT_03729___    201 VFGEAAALLFTAGLTTPRLNFTEWNPFSETSPLNIFRPAETLAVHIWNVN    250
                     |||||||||||||||||||||.:|||||||||||||||||||||||||||
BL03713___pst    201 VFGEAAALLFTAGLTTPRLNFADWNPFSETSPLNIFRPAETLAVHIWNVN    250

BSNT_03729___    251 TQGMIPDAEAIANGGSAVLVISVLVFNLAARWLGTMIYKKLTAN-    294
                     |||:||||||||||.|||||:|||:|||||||||:.|:|||||| 
BL03713___pst    251 TQGIIPDAEAIANGASAVLVLSVLIFNLAARWLGSFIHKKLTANK    295


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