Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03730 and BL03711

See DNA alignment / Visit BSNT_03730 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_03730___pstC.1.5803.seq
#    -bsequence pep-align/BL03711___pstC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03730___pstC-BL03711___pstC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03730___pstC-BL03711___pstC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03730___pstC
# 2: BL03711___pstC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     252/309 (81.6%)
# Similarity:   287/309 (92.9%)
# Gaps:           0/309 ( 0.0%)
# Score: 1298.0
# 
#
#=======================================

BSNT_03730___      1 MINNRENMSVSERLISSRQNRQLDEVRGRMIVTACALIMIAASVAITIFL     50
                     |:...|.:|..||||||:.||::||:|||::|.:||.||:||:::|||||
BL03711___pst      1 MVQKIEKLSAKERLISSKHNRKMDEIRGRILVASCAFIMMAAAISITIFL     50

BSNT_03730___     51 GVKGLQSFLVNGVSPIEFLTSLNWNPTDSDPKYGVLPFIFGSFAVTILSA    100
                     |.|||||||.||||||||||||:||||:.:|:||.||||.||||||:|::
BL03711___pst     51 GNKGLQSFLANGVSPIEFLTSLDWNPTNENPEYGALPFILGSFAVTLLAS    100

BSNT_03730___    101 LIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLV    150
                     ||||||||.||||||||||:||:||||||:||||||||||||||||||||
BL03711___pst    101 LIAAPLGIGGAIFMTEIAPSWGRKVLQPVVELLVGIPSVVYGFIGLTVLV    150

BSNT_03730___    151 PFIAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSY    200
                     |||:||||||:|||||||||||:||||||:||||.||:.||||:||||||
BL03711___pst    151 PFISQFKSSGSGHSLLAGTIVLAVMILPTVTSISTDALMSLPKNLREGSY    200

BSNT_03730___    201 ALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVL    250
                     ||||||||||||||:|||.|:|:|||||||||||||||||||||||:|.|
BL03711___pst    201 ALGATRWQTIRKVLIPAALPSLLTAVVLGMARAFGEALAVQMVIGNSRNL    250

BSNT_03730___    251 PESLFDTAGTLTTIITLNMGHTTYGSVENNTLWSMGLVLLVMSFLFILLI    300
                     .|||.|.|||||||||||||||||||||||||||||||||:|||||||||
BL03711___pst    251 FESLLDPAGTLTTIITLNMGHTTYGSVENNTLWSMGLVLLIMSFLFILLI    300

BSNT_03730___    301 RYLSSRRKV    309
                     ||||||||:
BL03711___pst    301 RYLSSRRKL    309


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