Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03730 and BL03711
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence dna-align/BSNT_03730___pstC.1.5803.seq
# -bsequence dna-align/BL03711___pstC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03730___pstC-BL03711___pstC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03730___pstC-BL03711___pstC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03730___pstC
# 2: BL03711___pstC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 952
# Identity: 708/952 (74.4%)
# Similarity: 708/952 (74.4%)
# Gaps: 44/952 ( 4.6%)
# Score: 2575.5
#
#
#=======================================
BSNT_03730___ 1 ATGAT--AAACAATAGAGAAAATATGTCTGTGAGCGAGCGTTTAATCAGC 48
|||.| |||.|||||||||| .||||.|.||..|||||..|.||||||
BL03711___pst 1 ATGGTTCAAAAAATAGAGAAA--CTGTCCGCGAAAGAGCGGCTGATCAGC 48
BSNT_03730___ 49 TCAAGGCAAAATCGGCAATTGGATGAAGTTCGGGGAAGAATGATTGTGAC 98
||.|.|||.|||||..||.||||||||.|.||.||.|| ||||.||..
BL03711___pst 49 TCCAAGCATAATCGCAAAATGGATGAAATCCGCGGGAG---GATTTTGGT 95
BSNT_03730___ 99 AGCAT-GTGCGC--TGATTATGATTGCGGCATCTGTTGCAATCACCATTT 145
.||.| |||||| |.||.|||||.||||||.|..||.|.|||||.||||
BL03711___pst 96 TGCGTCGTGCGCCTTTATCATGATGGCGGCAGCGATTTCGATCACAATTT 145
BSNT_03730___ 146 TCCTCGGCGTGAAGGGGCTGCAATCTTTTCTTGTAAATGGTGTAAGCCCA 195
|.|||||....||||||.|||||||||||||.|..|||||||||||.|||
BL03711___pst 146 TTCTCGGAAATAAGGGGTTGCAATCTTTTCTGGCCAATGGTGTAAGTCCA 195
BSNT_03730___ 196 ATTGAATTCTTAACGAGCTTAAATTGGAATCCTAC---AGATAGTGATCC 242
|||||.||||||||.||..||.||||||||||.|| .||.| |.||
BL03711___pst 196 ATTGAGTTCTTAACCAGTCTAGATTGGAATCCAACGAACGAAA---ACCC 242
BSNT_03730___ 243 GAAATACGGAGTGCTGCCATTTATTTTTGGCTCATTTGCAGTAACGATTC 292
..|||||||||..||.||.|||||..|.||.||.||||||||.||..|||
BL03711___pst 243 TGAATACGGAGCACTTCCGTTTATACTCGGATCTTTTGCAGTGACCCTTC 292
BSNT_03730___ 293 TTTCTGCTCTAATCGCTGCGCCGCTTGGCATTGCAGGTGCGATTTTTATG 342
||.|..||.|.||.|||||.|||||.||.||.|.||||||||||||.|||
BL03711___pst 293 TTGCATCTTTGATTGCTGCACCGCTAGGAATAGGAGGTGCGATTTTCATG 342
BSNT_03730___ 343 ACAGAGATTGCCCCGAAT--TGGGGAAAGAAAGTGCTGCAGCCGGTGATT 390
||.||.||.||.|| || |||||.|..|||||||||||||||||..|.
BL03711___pst 343 ACGGAAATCGCGCC--ATCATGGGGCAGAAAAGTGCTGCAGCCGGTTGTC 390
BSNT_03730___ 391 GA---GCTTTTAGTCGGTATTCCATCTGTTGTTTATGGATTCATAGGTCT 437
|| |||| ||.||.|||||.||.||.|||||||||||||||||.||
BL03711___pst 391 GAATTGCTT---GTTGGCATTCCTTCCGTCGTTTATGGATTCATAGGCCT 437
BSNT_03730___ 438 TACAGTATTGGTGCCGTTTATCGCCCAGTTCAAATCGAGCGGAACAGGGC 487
||||||.||.||||||||.||..|.|||||.||.||.||||||.|.||.|
BL03711___pst 438 TACAGTGTTAGTGCCGTTCATTTCACAGTTTAAGTCAAGCGGATCGGGCC 487
BSNT_03730___ 488 ACAGTTTATTGGCGGGAACGATTGTCCTTTCCGTCATGATTCTCCCGACG 537
||||..|..|||||||||||||.|||||..|.|||||||||.|.||||||
BL03711___pst 488 ACAGCCTTCTGGCGGGAACGATCGTCCTGGCTGTCATGATTTTGCCGACG 537
BSNT_03730___ 538 ATCACATCGATTTCTGCTGATGCAATGGCT----TCTCTTCCGAAGAGTT 583
.||||.||||||||..|.||||| ||| ||.||.|||||.|.|.
BL03711___pst 538 GTCACTTCGATTTCAACGGATGC----GCTCATGTCGCTGCCGAAAAATC 583
BSNT_03730___ 584 TACGAGAGGGTTCTTACGCGCTTGGTGCGACAAGATGGCAGACGATCAGA 633
|.||.||.||.||.|||||..|.||.||.||..|.||||||||||||.|.
BL03711___pst 584 TCCGCGAAGGATCATACGCATTAGGCGCAACCCGCTGGCAGACGATCCGC 633
BSNT_03730___ 634 AAAGTACTTGTGCCTGCAGCTTTTCCAACATTGATGACAGCTGTTGTGTT 683
|||||.||..|.||.|||||..|.||..|..|..|||||||.||.||.||
BL03711___pst 634 AAAGTGCTGATACCGGCAGCGCTGCCTTCGCTTCTGACAGCCGTCGTCTT 683
BSNT_03730___ 684 AGGCATGGCTCGGGCGTTCGGTGAAGCTTTGGCTGTTCAGATGGTCATTG 733
.||.|||||..||||||||||.|||||..||||.||.|||||||||||.|
BL03711___pst 684 GGGAATGGCGAGGGCGTTCGGCGAAGCGCTGGCCGTGCAGATGGTCATCG 733
BSNT_03730___ 734 GAAATACAAGA-----GTATTGCCGGAAAGCCTGTTTGACACTGCGGGAA 778
|||||.|..|| ||.| ||.|||||.||.|||.|||||||.|
BL03711___pst 734 GAAATTCCCGAAATCTGTTT-----GAGAGCCTTTTAGACCCTGCGGGGA 778
BSNT_03730___ 779 CGCTGACAACGATCATCACGCTGAATATGGGCCACACCACATACGGAAGT 828
|..|||||||||||||.|||.||||.||||||||.||.||||||||.||.
BL03711___pst 779 CATTGACAACGATCATTACGTTGAACATGGGCCATACAACATACGGGAGC 828
BSNT_03730___ 829 GTTGAAAACAATACGCTGTGGTCAATGGGGCTTGTGCTTCTGGTGATGTC 878
||.||||||||||||||.|||||||||||||||||.||||||.|.|||||
BL03711___pst 829 GTGGAAAACAATACGCTCTGGTCAATGGGGCTTGTCCTTCTGATCATGTC 878
BSNT_03730___ 879 ATTCCTGTTCATCCTGCTTATTCGCTACTTGTCATCTAGGAGGAAAGTGT 928
.|||.|||||||||||||.||.|||||..|||||||.|||||||||.|||
BL03711___pst 879 GTTCTTGTTCATCCTGCTCATCCGCTATCTGTCATCCAGGAGGAAACTGT 928
BSNT_03730___ 929 AA 930
||
BL03711___pst 929 AA 930
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