Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03740 and BL03704

See DNA alignment / Visit BSNT_03740 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03740___yqfX.1.5803.seq
#    -bsequence pep-align/BL03704.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03740___yqfX-BL03704.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03740___yqfX-BL03704.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03740___yqfX
# 2: BL03704
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:      77/158 (48.7%)
# Similarity:    88/158 (55.7%)
# Gaps:          35/158 (22.2%)
# Score: 350.0
# 
#
#=======================================

BSNT_03740___      1 MTLTEKFSKHESGKMDQTIKAPLIKQKGELKVANDYEKRDNNSYYVDHGS     50
                                                    :..|...||.|.  ..:.:
BL03704            1 -------------------------------MERDQNVRDRNR--AGYDA     17

BSNT_03740___     51 EGTNITRDNDGFFEETAAEIAEPYRAADRSNDQDNDRSDGNVNEGRGIGY    100
                     :..:.|.|||.|.||||||:|..||.  .:.|....|:|.:...||..||
BL03704           18 DLVDATLDNDEFLEETAAEVAPTYRT--DNGDNGEARNDADAAGGRVTGY     65

BSNT_03740___    101 IALALSIISLFVLPVLLGAAGIIVGYIARRRGAQGLGAWAMGIGVVSLVL    150
                     |||||||||||:||||||.|||||||||||:||.||||||||||.|||||
BL03704           66 IALALSIISLFMLPVLLGIAGIIVGYIARRQGAAGLGAWAMGIGAVSLVL    115

BSNT_03740___    151 GIFIIPFF    158
                     ||||.|||
BL03704          116 GIFITPFF    123


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