Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05519 and BL03693
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence pep-align/BSNT_05519.1.5803.seq
# -bsequence pep-align/BL03693.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05519-BL03693.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05519-BL03693.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05519
# 2: BL03693
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 36/228 (15.8%)
# Similarity: 64/228 (28.1%)
# Gaps: 123/228 (53.9%)
# Score: 208.5
#
#
#=======================================
BSNT_05519 0 -------------------------------------------------- 0
BL03693 1 MSNSIKSLEPINIPCGWFVKYNDLTDTHEKVEPNTKLLELEKQRYHAAVK 50
BSNT_05519 0 -------------------------------------------------- 0
BL03693 51 IIKGQDEYLIHIYDNHRETIDTINVEDRRQLVKELERIIWKIEAAAFGGN 100
BSNT_05519 1 ----------MRKIKKMPEISLQPLRIPKGWTINQNSFREIDPKNLAPDD 40
:| ||||:|||::.|...:|||..|..|.
BL03693 101 FFIFEGPPDYLR------------LRIPQGWTVSYNKLIDIDPDQLEEDS 138
BSNT_05519 41 EKWLFFSQDLMQLTYSRKNYLLDLGWYPDADANGFYQLVMMQNEDWDQPI 90
:.|..|:..|:||.:.....:||:|||.|.:.:|.:.:::::|.||:.|:
BL03693 139 DDWFNFTSSLLQLEHKESRLILDVGWYVDIEPSGTFYMLLIKNLDWENPL 188
BSNT_05519 91 YEFQTNSHIEIVKNIEFILNKVTNNEM- 117
.:.:|....::|.:||..|.|...::.
BL03693 189 EDMETRRPEKLVDHIEAALQKAAEHQYK 216
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