Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05519 and BL03693
See
Amino acid alignment /
Visit
BSNT_05519 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence dna-align/BSNT_05519.1.5803.seq
# -bsequence dna-align/BL03693.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05519-BL03693.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05519-BL03693.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05519
# 2: BL03693
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 695
# Identity: 245/695 (35.3%)
# Similarity: 245/695 (35.3%)
# Gaps: 385/695 (55.4%)
# Score: 405.0
#
#
#=======================================
BSNT_05519 0 -------------------------------------------------- 0
BL03693 1 TTGTCTAATTCCATAAAATCATTAGAACCTATAAATATACCGTGCGGCTG 50
BSNT_05519 1 --------------------------------ATGAGAAAGATAAAAAAA 18
||||.||||.|.||..||
BL03693 51 GTTCGTTAAATATAATGACTTAACCGACACACATGAAAAAGTTGAACCAA 100
BSNT_05519 19 ATGCCAGAAATAAGTTTACAACCCTT--------AAGGAT---------- 50
||.|| ||||.| |||.|| || ||.|||
BL03693 101 ATACC--AAATTA--TTAGAA---TTAGAAAAACAAAGATATCATGCTGC 143
BSNT_05519 51 --TCCAAA------------AGGATGGACCATA----AATCAAA------ 76
||.||| |||||| .||| |.|||.|
BL03693 144 GGTCAAAATCATTAAAGGCCAGGATG---AATATCTTATTCATATTTATG 190
BSNT_05519 77 ACAGTTTTAGAGAA---ATTGATCC----------GAAAA--------AC 105
|||.|..||||||| |||||..| |||.| |.
BL03693 191 ACAATCATAGAGAAACGATTGACACAATCAATGTTGAAGATCGCAGGCAG 240
BSNT_05519 106 CTAGCACCAG-------ACG------ATGAAAAATGG------------T 130
||||.|..|| ||| .||.|||||.| |
BL03693 241 CTAGTAAAAGAGCTGGAACGGATCATTTGGAAAATAGAAGCGGCGGCATT 290
BSNT_05519 131 TG---------TTTT--TTTCACAAG------------ATTTA------- 150
|| |||| |||...||| |||||
BL03693 291 TGGAGGGAACTTTTTCATTTTTGAAGGGCCTCCTGACTATTTACGTCTTA 340
BSNT_05519 151 -------------ATG--------------------CAATTAACAT---- 163
||| .||||.|.||
BL03693 341 GAATTCCTCAAGGATGGACCGTCTCTTATAATAAACTAATTGATATCGAT 390
BSNT_05519 164 -------------------------------------ACTCT-CGTAAAA 175
|||.| |||.|..
BL03693 391 CCAGATCAGTTAGAGGAGGACAGTGATGACTGGTTTAACTTTACGTCATC 440
BSNT_05519 176 ATTACT------------TA----------CTTGATTTAGGTTGGTATCC 203
|||||| || |||||||| .
BL03693 441 ATTACTACAGTTGGAGCATAAAGAAAGCCGCTTGATTT-----------T 479
BSNT_05519 204 AGATG-CGGATGCTA-ATGGATTTT-----ATCA---ACTAGTTATGATG 243
||||| |||.||.|| .|||||.|| .||| |||..|||| |||
BL03693 480 AGATGTCGGCTGGTACGTGGATATTGAGCCTTCAGGCACTTTTTAT-ATG 528
BSNT_05519 244 C---------AAAATGAGGATTGGGATCAACCCATATATGAATTTCAGAC 284
| |.|||..|||.||||| .|||||.| || || ||||
BL03693 529 CTATTAATTAAGAATTTGGACTGGGA-AAACCCGT-TA-GA-----AGAC 570
BSNT_05519 285 A----------AATAGCCATATTGAAA---TAGTTAAAAATATAGAA--- 318
| ||.|.| .|||| ||||..|..|.||||||
BL03693 571 ATGGAAACGAGAAGACC-----GGAAAAATTAGTGGACCACATAGAAGCC 615
BSNT_05519 319 ----TTTATATTAAACAAAGTTACGAATA-----ATGAAATGTAG 354
||.|.| ||.|| ..||||.| ||.|| |||
BL03693 616 GCCCTTCAAA--AAGCA----GCCGAACATCAATATAAA---TAG 651
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.