Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05521 and BL03686
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence pep-align/BSNT_05521.1.5803.seq
# -bsequence pep-align/BL03686___ywqJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05521-BL03686___ywqJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05521-BL03686___ywqJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05521
# 2: BL03686___ywqJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 676
# Identity: 348/676 (51.5%)
# Similarity: 398/676 (58.9%)
# Gaps: 190/676 (28.1%)
# Score: 1712.5
#
#
#=======================================
BSNT_05521 1 MSKVFESKSLIEEAKSRKKQYETLEEQLNTLKKAFQGVADLGDNFKGKGA 50
.||||:.||||.|.:|||||||.|:||.||||||.|||||||:|:||||
BL03686___ywq 1 -MKVFEAHSLIEAANNRKKQYETFEDQLQTLKKAFLGVADLGDDFQGKGA 49
BSNT_05521 51 DNIKDFFQGQAEIVDSWLTLVSAQIAFLNGISGDIKDQELNDSYVETSFL 100
||||||::||||||||||.||.|||||.||:||||||::|:|||||.|||
BL03686___ywq 50 DNIKDFYKGQAEIVDSWLKLVEAQIAFFNGVSGDIKDKKLSDSYVEVSFL 99
BSNT_05521 101 DHELPNGDLKASEIVSAHKEEIDSILSGISDIIDLDMYTLDDYADKMGDA 150
||||.|.||||:||||..|.|:|.|::.||||:|||.:|||||.|||..|
BL03686___ywq 100 DHELKNADLKATEIVSGLKLEMDKIIASISDIVDLDNWTLDDYIDKMSKA 149
BSNT_05521 151 QKIRRDTITAVDKLDESLTTEYQNLESLDNAVLTKYSVLMQATSNGKSAS 200
|..|::||.||:||||||.|||.||::||:|||.|||.||:|||:||:||
BL03686___ywq 150 QTTRQNTIDAVNKLDESLKTEYTNLQALDSAVLGKYSGLMEATSHGKTAS 199
BSNT_05521 201 PMYYDKKAFHSNEVYKSVIEVENQGTTYIDAKTQQAEARRLQEKAEEEAN 250
|||:..|:|||:|:||:.||||||...||:.|.:||||||||||.|||||
BL03686___ywq 200 PMYFSLKSFHSSEIYKNTIEVENQAANYIEFKNEQAEARRLQEKQEEEAN 249
BSNT_05521 251 KPWYEKTWDGVCNFTGEVTGYYDYKRATEGVDPVTGEKLSTAERVTAGAM 300
|||..|..|....|.|||:||||||||.|||||||||||:..:||.||||
BL03686___ywq 250 KPWDLKALDAAGTFVGEVSGYYDYKRAAEGVDPVTGEKLTDGQRVAAGAM 299
BSNT_05521 301 AAAGFIPVVGWAGRAFKGGKAIYKTGKAAIAAEHALDAYKTGKSLDILKM 350
|||||||:|||||||||||||||||||..|||:|||||||..|:|::|||
BL03686___ywq 300 AAAGFIPIVGWAGRAFKGGKAIYKTGKGLIAADHALDAYKASKTLNVLKM 349
BSNT_05521 351 TEMGAYGLVASNGFSEAVTGRDMFGNKVSEEKRKTGALEAALSLVGAGA- 399
||||||||||||||||||||:||||||||||:||.|.:||.||||||||
BL03686___ywq 350 TEMGAYGLVASNGFSEAVTGKDMFGNKVSEERRKQGLIEATLSLVGAGAV 399
BSNT_05521 400 ----------LAKHIDKGIPLATHSK---FQKANKTLEKVKQFKVPTNVR 436
|||...|.||||...| .||.|..|||||.|:||||||
BL03686___ywq 400 AKTANHGAQTLAKTAGKNIPLAKSPKAALVQKGNNILEKVKSFQVPTNVR 449
BSNT_05521 437 VYAERPVTPEGFTFGIPTVRVDVEKTAVKDLGIVKMV-----VMAVVREA 481
||.|:|.:..|...|.|.|||:||||.||:||||||| |....|
BL03686___ywq 450 VYVEQPASATGHRIGTPIVRVNVEKTPVKELGIVKMVSGGGNVSKGAR-- 497
BSNT_05521 482 LIVLTFLKITIK-------------------------------------- 493
|..||.:.
BL03686___ywq 498 ----TGSKIDVGKADLGVLRQKWNVPKTDTVAVGKTDVEGLENLVFEGGS 543
BSNT_05521 493 -------------------------------------------------- 493
BL03686___ywq 544 PKVRKEAGLPDLDSVMPDRPIKSPGKIASATRHAEEGVLNDFISKVEALG 593
BSNT_05521 493 -------------------------------------------------- 493
BL03686___ywq 594 KNPAEITGTLKIHQSNPKGVCPTCIQGLNNPNVPAGVFKQFSEMFPNLTI 643
BSNT_05521 493 -------------------------- 493
BL03686___ywq 644 EVTSETIQGIKPNGRLNLVIKNGEYI 669
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