Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05522 and BL03685

See DNA alignment / Visit BSNT_05522 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence pep-align/BSNT_05522___ywqI.1.5803.seq
#    -bsequence pep-align/BL03685.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05522___ywqI-BL03685.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05522___ywqI-BL03685.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05522___ywqI
# 2: BL03685
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      51/87 (58.6%)
# Similarity:    66/87 (75.9%)
# Gaps:           1/87 ( 1.1%)
# Score: 242.0
# 
#
#=======================================

BSNT_05522___      1 MSEIKLKYDTVIKTLDSVKDALADVSI-GAAGSNGKNKLDYTKKYHEREE     49
                     |:.||||::||||.|::|:.|:..:.: ....:.|||||.||.|.||||:
BL03685            1 MTTIKLKHETVIKKLEAVRAAIDALDLPNPPKAAGKNKLTYTTKCHEREQ     50

BSNT_05522___     50 NIKTMLGDYKKAVQKNIEDTKDNVDSLKEQDEAIAVK     86
                     ||..|:.||||||.|||:|||:|||.|||||:|||.|
BL03685           51 NIHQMVADYKKAVHKNIKDTKENVDLLKEQDKAIARK     87


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