Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05522 and BL03685
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:39
# Commandline: needle
# -asequence dna-align/BSNT_05522___ywqI.1.5803.seq
# -bsequence dna-align/BL03685.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05522___ywqI-BL03685.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05522___ywqI-BL03685.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05522___ywqI
# 2: BL03685
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity: 188/270 (69.6%)
# Similarity: 188/270 (69.6%)
# Gaps: 15/270 ( 5.6%)
# Score: 579.0
#
#
#=======================================
BSNT_05522___ 1 ATGTCAGA-AATTAAGCTGAAGTACGACACAGTCATCAAAACATTGGATT 49
|||.| || |||.||||||||..|.||.||.||||||||||...||||..
BL03685 1 ATGAC-GACAATCAAGCTGAAACATGAAACGGTCATCAAAAAGCTGGAGG 49
BSNT_05522___ 50 CTGTCAAAGATGCGCTTGCT------GACGTATCAATCGGCGCCGCGGGG 93
|.||.|.||..|||.|||.| |||.|..|||.| .|.|||...|.
BL03685 50 CCGTAAGAGCGGCGATTGATGCCCTAGACCTGCCAAAC-CCTCCGAAAGC 98
BSNT_05522___ 94 TCCAATGGAAAAAACAAACTCGA-TTATACGAAAAAATACCATGAGCGTG 142
|.|| ||.|||||.||| |.|| .|||||||.|||.|.|||.||.||.|
BL03685 99 TGCA--GGGAAAAATAAA-TTGACATATACGACAAAGTGCCACGAACGCG 145
BSNT_05522___ 143 AGGAGAACA-TCAAAACCATGCTCGGAGATTATAAAAAAGCGGTACAGAA 191
||.|||||| |||..| .|||.|.|..|||||.||||||||.|||||.||
BL03685 146 AGCAGAACATTCATCA-GATGGTGGCCGATTACAAAAAAGCCGTACACAA 194
BSNT_05522___ 192 AAATATCGAGGATACAAAGGATAATGTAGATTCACTCAAAGAGCAGGACG 241
|||.||..|||||||.|||||.|||||.||||..||.||||||||||||.
BL03685 195 AAACATAAAGGATACGAAGGAAAATGTCGATTTGCTGAAAGAGCAGGACA 244
BSNT_05522___ 242 AGGCGATAGCGGTAAAATAG 261
|.||.||.||...|||||||
BL03685 245 AAGCAATCGCCAGAAAATAG 264
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