Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03760 and BL03681
See
DNA alignment /
Visit
BSNT_03760 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence pep-align/BSNT_03760___dnaG.1.5803.seq
# -bsequence pep-align/BL03681___dnaG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03760___dnaG-BL03681___dnaG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03760___dnaG-BL03681___dnaG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03760___dnaG
# 2: BL03681___dnaG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 607
# Identity: 466/607 (76.8%)
# Similarity: 535/607 (88.1%)
# Gaps: 4/607 ( 0.7%)
# Score: 2435.5
#
#
#=======================================
BSNT_03760___ 1 MGNRIPDEIVDQVQKSADIVEVIGDYVQLKKQGRNYFGLCPFHGESTPSF 50
||||||||||:|||||||||||||:||||:|||||||||||||||:||||
BL03681___dna 1 MGNRIPDEIVEQVQKSADIVEVIGEYVQLRKQGRNYFGLCPFHGENTPSF 50
BSNT_03760___ 51 SVSPDKQIFHCFGCGAGGNVFSFLRQMEGYSFAESVSHLADKYQIDFPDD 100
|||.:|||||||||||||||||||||||||||.|:|||||||||||.|:.
BL03681___dna 51 SVSGEKQIFHCFGCGAGGNVFSFLRQMEGYSFTEAVSHLADKYQIDLPEQ 100
BSNT_03760___ 101 ITVHSGARPESSGEQKMAEAHELLKKFYHHLLINTKEGQEALDYLLSRGF 150
:...|.....||.||||||||:||||||||||:||||||.||||||.|||
BL03681___dna 101 VAAVSAYSTGSSDEQKMAEAHDLLKKFYHHLLVNTKEGQAALDYLLERGF 150
BSNT_03760___ 151 TKELIDEFQIGYALDSWDFITKFLVKRGFSEAQMEKAGLLIRREDGSGYF 200
..|.|::|:||.||||||||||||.:|||..|.||:|||:||||:|.|||
BL03681___dna 151 KMEQIEQFEIGCALDSWDFITKFLERRGFDLALMERAGLIIRRENGDGYF 200
BSNT_03760___ 201 DRFRNRVMFPIHDHHGAVVAFSGRALGSQQPKYMNSPETPLFHKSKLLYN 250
||||||:|||||||||..||||||....:|||||||||||||.||||||:
BL03681___dna 201 DRFRNRIMFPIHDHHGTTVAFSGRTFTGEQPKYMNSPETPLFRKSKLLYH 250
BSNT_03760___ 251 FYKARLHIRKQERAVLFEGFADVISAVSSGVKESIATMGTSLTDDHVKIL 300
|::|||||||:||||||||||||||||:|||||||||||||||::|.||:
BL03681___dna 251 FHQARLHIRKEERAVLFEGFADVISAVTSGVKESIATMGTSLTEEHAKII 300
BSNT_03760___ 301 RRNVEEIILCYDSDKAGYEATLKASELLQKKGCKVRVAMIPDGLDPDDYI 350
||||.|:|||||||.|||||||||:|:||||||.|:||||||||||||||
BL03681___dna 301 RRNVGEVILCYDSDHAGYEATLKAAEILQKKGCNVKVAMIPDGLDPDDYI 350
BSNT_03760___ 351 KKFGGEKFKNDIIDASVTVMAFKMQYFRKGKNLSDEGDRLAYIKDVLKEI 400
||||.||||||:|.||||:|.|||.|||||:||||||||||||.|||||:
BL03681___dna 351 KKFGSEKFKNDVIGASVTMMTFKMNYFRKGRNLSDEGDRLAYINDVLKEV 400
BSNT_03760___ 401 STLSGSLEQEVYVKQLASEFSLSQESLTEQLSVFSKQ--NKPADNS-GET 447
|.|||.||||:|:||||:|||:|.|||.:|||||.|| ::..::| .::
BL03681___dna 401 SLLSGPLEQEIYIKQLANEFSISFESLKDQLSVFEKQAASRSRESSRQDS 450
BSNT_03760___ 448 KTRRAHLTTKARQKR-LRPAYENAERLLLAHMLRDRSVIKKVIDRVGFQF 496
|.|:|.::...|:|. ||||:|||||:|||||:.||.||:||::||||:|
BL03681___dna 451 KERQAAVSRAPRRKTGLRPAHENAERMLLAHMIHDRDVIRKVLERVGFEF 500
BSNT_03760___ 497 NIDEHRALAAYLYAFYEEGAELTPQHLMARVTDDHISQLLSDILMLQVNQ 546
|:|:|||:||||||.|||||:::.|.|..||.|..:.|||:||||||||:
BL03681___dna 501 NLDQHRAIAAYLYAMYEEGADISIQELFKRVEDQELGQLLTDILMLQVNE 550
BSNT_03760___ 547 ELSEAELSDYVKKVLNQRNWSMIKEKEAERAEAERQKDFLRAASLAQEIV 596
||||||||||||||||.|||||||||||.||||||||||::||:||||||
BL03681___dna 551 ELSEAELSDYVKKVLNYRNWSMIKEKEAARAEAERQKDFIKAATLAQEIV 600
BSNT_03760___ 597 TLNRSLK 603
.||||||
BL03681___dna 601 KLNRSLK 607
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.