Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03760 and BL03681
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_03760___dnaG.1.5803.seq
# -bsequence dna-align/BL03681___dnaG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03760___dnaG-BL03681___dnaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03760___dnaG-BL03681___dnaG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03760___dnaG
# 2: BL03681___dnaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1891
# Identity: 1350/1891 (71.4%)
# Similarity: 1350/1891 (71.4%)
# Gaps: 146/1891 ( 7.7%)
# Score: 4707.5
#
#
#=======================================
BSNT_03760___ 1 ATGGGAAATCGGATACCAGATGAAATTGTGGATCAGGTGCAAAAGTCGGC 50
|||||.|||||.||||||||.||||||||.||.||||||||.||.||.||
BL03681___dna 1 ATGGGCAATCGTATACCAGACGAAATTGTAGAACAGGTGCAGAAATCAGC 50
BSNT_03760___ 51 AGATATCGTTGAAGTCATAGGTGATTATGTTCAATTAAAGAAGCAAGGCC 100
.||||||||.|||||.||.||.||.||.||.||.||||..||.||.||.|
BL03681___dna 51 TGATATCGTAGAAGTTATCGGAGAGTACGTCCAGTTAAGAAAACAGGGGC 100
BSNT_03760___ 101 GAAACTACTTTGGACTCTGTCCTTTTCATGGAGAAAGCACACCTTCGTTT 150
|.||.||.|||||.||.||||||||||||||.||.|.||||||.||.|||
BL03681___dna 101 GTAATTATTTTGGGCTTTGTCCTTTTCATGGTGAGAACACACCATCTTTT 150
BSNT_03760___ 151 TCCGTATCGCCCGACAAACAGATTTTTCATTGCTTTGGCTGCGGAGCGGG 200
||.||.||....||.|||||||||||||||||.|||||||||||||||||
BL03681___dna 151 TCTGTTTCTGGAGAAAAACAGATTTTTCATTGTTTTGGCTGCGGAGCGGG 200
BSNT_03760___ 201 CGGCAATGTTTTCTCTTTTTTAAGGCAGATGGAAGGCTATTCTTTTGCCG 250
.||.||.|||||.||.||||||||.||.||||||||||||||.|||.|||
BL03681___dna 201 AGGGAACGTTTTTTCATTTTTAAGACAAATGGAAGGCTATTCATTTACCG 250
BSNT_03760___ 251 AGTCGGTTTCTCACCTTGCTGACAAATACCAAATTGATTTTCCAGA---- 296
||.|.||.||||||||.||.||||||||.|||||.|||.|.||.||
BL03681___dna 251 AGGCTGTCTCTCACCTGGCGGACAAATATCAAATAGATCTGCCGGAGCAG 300
BSNT_03760___ 297 -----TGATATAACAGTCCATTCCGGAGCCCGGCCAGAGTCTTCTGGA-G 340
.|.|.||.||| |||.| |||.|.|.||| ||| ||| |
BL03681___dna 301 GTCGCAGCTGTATCAG--CATAC---AGCACAGGCAG----TTC-GGATG 340
BSNT_03760___ 341 AACAAAAAATGGCTGAGGCACATGAGCTCCTGAAGAAATTTTACCATCAT 390
||||.||||||||.||.||.|||||.||..|.|||||||||||.||||||
BL03681___dna 341 AACAGAAAATGGCGGAAGCTCATGATCTGTTAAAGAAATTTTATCATCAT 390
BSNT_03760___ 391 TTGTTAATAAATACAAAAGAAGGTCAAGAGGCACTGGATTATCTGCTTTC 440
|||.|..|.||||||||.|||||.||.|..||.||.||||||.|||||..
BL03681___dna 391 TTGCTCGTCAATACAAAGGAAGGCCAGGCAGCGCTCGATTATTTGCTTGA 440
BSNT_03760___ 441 TAGGGGCTTTACGAAAGAGCTGATTGATGAATTTCAGATTGGCTATGCTC 490
.||.|||||||.||..||||.|||.||..|.|||.|.||.||.|..||.|
BL03681___dna 441 AAGAGGCTTTAAGATGGAGCAGATCGAGCAGTTTGAAATCGGATGCGCGC 490
BSNT_03760___ 491 TTGATTCTTGGGACTTTATTACGAAATTCCTTGTAA---AGAGGGGATTT 537
||||.||.|||||.||.||.|||||.|| .|||.|| ||||| |||
BL03681___dna 491 TTGACTCGTGGGATTTCATCACGAAGTT-TTTGGAACGGAGAGG---TTT 536
BSNT_03760___ 538 AGTGA---GGCACAAATGGAAAAAGCGGGTCTCCTGATCAGACGCGAAGA 584
||| .||.|..|||||||.|||.||.|||.|.|||||||||||..|
BL03681___dna 537 --TGATCTTGCGCTGATGGAAAGAGCTGGACTCATCATCAGACGCGAGAA 584
BSNT_03760___ 585 CGGAAGCGGATATTTCGACCGCTTCAGAAACCGTGTCATGTTTCCGATCC 634
|||...|||||||||.|||||.|||||||||.|..|.|||||||||||.|
BL03681___dna 585 CGGCGACGGATATTTTGACCGTTTCAGAAACAGGATTATGTTTCCGATTC 634
BSNT_03760___ 635 ATGATCATCACGGGGCTGTTGTTGCTTTCTCAGGCAGGGCTCTTGGCAGC 684
|||||||||||||..|....||.|||||.||.||.|||.|..| || |
BL03681___dna 635 ATGATCATCACGGCACAACGGTCGCTTTTTCCGGAAGGACGTT---CA-C 680
BSNT_03760___ 685 C----AGCAGCCTAAGTATATGAACAGTCCTGAAACCCCGCTCTTTCATA 730
| |||||||.||.||.||||||||.||.|||||.|||||.||||..|
BL03681___dna 681 CGGGGAGCAGCCAAAATACATGAACAGCCCGGAAACGCCGCTTTTTCGAA 730
BSNT_03760___ 731 AAAGTAAACTGCTTTACAATTTTTATAAGGCCCGCCTTCATA-TCAGAAA 779
||||.||.||.||.||..||||..||.|||||||||||||.| ||.||||
BL03681___dna 731 AAAGCAAGCTTCTCTATCATTTCCATCAGGCCCGCCTTCACATTCGGAAA 780
BSNT_03760___ 780 GCAGGAAAGAGCAGTCTTATTTGAAGGGTTTGCTGATGTCATATCGGCCG 829
| |.|||||.||.|||.|.||||||||.|||||.||||||||.||.||||
BL03681___dna 781 G-AAGAAAGGGCCGTCCTTTTTGAAGGATTTGCCGATGTCATTTCAGCCG 829
BSNT_03760___ 830 TAAGCTCGGGTGTAAAAGAAAGCATAGCCACGATGGGAACGTCTCTTACA 879
|.|.|||.|||||.||||||...||.|||||||||||.||.||.||.||.
BL03681___dna 830 TCACCTCCGGTGTGAAAGAATCGATCGCCACGATGGGTACATCGCTGACG 879
BSNT_03760___ 880 GATGATCATGTCAAGATCTTGAGAAGAAACGTCGAAGAAATCATTCTTTG 929
||.||.||||..||||||.|.||..||||.||||.|||..||||.||.||
BL03681___dna 880 GAAGAACATGCGAAGATCATCAGGCGAAATGTCGGAGAGGTCATACTGTG 929
BSNT_03760___ 930 CTATGACTCTGATAAAGCCGGTTATGAAGCCACCTTAAAAGCTTCGGAGC 979
|||||||||.|||.|.|||||||||||||||||..|.|||||..|||||.
BL03681___dna 930 CTATGACTCGGATCATGCCGGTTATGAAGCCACGCTGAAAGCGGCGGAGA 979
BSNT_03760___ 980 TTCTGCAAAAAAAAGGCTGCAAAGTCAGAGTTGCAATGATTCCTGACGGA 1029
||||.||.||||||||||||||.||||..||.||.|||||.||||||||.
BL03681___dna 980 TTCTTCAGAAAAAAGGCTGCAACGTCAAGGTGGCCATGATACCTGACGGG 1029
BSNT_03760___ 1030 TTGGACCCTGATGATTACATCAAAAAATTCGGCGGGGAAAAATTTAAAAA 1079
.||||.||.|||||.||||||||||||||||||.|.||.|||||.|||||
BL03681___dna 1030 CTGGATCCCGATGACTACATCAAAAAATTCGGCAGCGAGAAATTCAAAAA 1079
BSNT_03760___ 1080 CGACATTATTGACGCCAGTGTCACCGTAATGGCGTTCAAAATGCAATATT 1129
.||..|.||.|..|||||.||.||..|.|||.||||.||||||.|.||||
BL03681___dna 1080 TGATGTAATAGGGGCCAGCGTTACGATGATGACGTTTAAAATGAACTATT 1129
BSNT_03760___ 1130 TCCGAAAAGGAAAGAACCTGTCCGATGAAGGCGACCGACTAGCTTACATT 1179
||||.||.||.|..||||||||.||||||||.|||||..||||.||.||.
BL03681___dna 1130 TCCGCAAGGGCAGAAACCTGTCTGATGAAGGAGACCGTTTAGCCTATATC 1179
BSNT_03760___ 1180 AAAGACGTACTGAAAGAAATCAGCACGCTT-TCAG-GGT-CTCTAGAGCA 1226
||.||.||||||||.|||.||||| ||| |||| ||| ||.|.||.||
BL03681___dna 1180 AACGATGTACTGAAGGAAGTCAGC---CTTCTCAGCGGTCCTTTGGAACA 1226
BSNT_03760___ 1227 GGAAGTCTATGTAAAGCAGCTTGCTTCAGAGTTTTCGCTTTCACAGGAGT 1276
||||.|.||..|.||.|||||.||....||.|||||..|.|||...||.|
BL03681___dna 1227 GGAAATATACATCAAACAGCTGGCAAATGAATTTTCAATCTCATTTGAAT 1276
BSNT_03760___ 1277 CTTTAACTGAGCAGCTGTCTGT-TTTCAGCAAGCAAAACAAACCTGCTGA 1325
|.||.|..||.|||||.||.|| ||| |.|||.|| .||||
BL03681___dna 1277 CCTTGAAGGATCAGCTTTCCGTATTT------GAAAAGCA----GGCTG- 1315
BSNT_03760___ 1326 CAA----TAGCGGTGAAA---------------CAAAAACGCGGCGAG-- 1354
||| .|||.|.|||| |.|||..||||| ||
BL03681___dna 1316 CAAGCCGCAGCAGGGAAAGCAGCCGCCAGGACTCTAAAGAGCGGC-AGGC 1364
BSNT_03760___ 1355 ---CGCATCTGACAACAAAAGCAAGGC--------AAAAACG----TTTG 1389
||.||| ||..|.| |||.||| ||
BL03681___dna 1365 GGCCGTATC-----------GCGCGCCCCTCGGAGAAAGACGGGGCTT-- 1401
BSNT_03760___ 1390 CGTCCGGCGTATGAAAATGCAGAAAGGCTGCTACTCGCTCACATGCTTCG 1439
||.|||||..||||.|||||.||..||.||||.||.||.||||||.|||.
BL03681___dna 1402 CGGCCGGCTCATGAGAATGCGGAGCGGATGCTCCTGGCCCACATGATTCA 1451
BSNT_03760___ 1440 AGATCGGAGCGTCATCAAAAAAGTGATTGACCGGGTAGGGTTTCAATTTA 1489
.||.|||..||||||...|||.||..|.||.|||||.||.|||.||||.|
BL03681___dna 1452 TGACCGGGACGTCATTCGAAAGGTTTTGGAACGGGTGGGCTTTGAATTCA 1501
BSNT_03760___ 1490 ATATTGATGAGCACCGGGC-ATTAGCCGCCTATCTTTATGCTTTTTATGA 1538
|..|||||.|||||||.|| ||| |||||.|||.|.||.||..|.|||||
BL03681___dna 1502 ACCTTGATCAGCACCGAGCGATT-GCCGCTTATTTGTACGCCATGTATGA 1550
BSNT_03760___ 1539 AGAGGGAGCCGAGCTGACGCCTCAGCATCT-GATGGCCAGG--------- 1578
|||.|||||.|| |||.| .|| |||||
BL03681___dna 1551 AGAAGGAGCGGA-------------CATTTCCAT--CCAGGAGCTCTTTA 1585
BSNT_03760___ 1579 ---GTGACGGATGATCATATAA----GCCAGCTCTTGTCTGATATATTAA 1621
|.|.| ||.||||| ..|| |||||||..||.|.|||||.||||
BL03681___dna 1586 AGAGAGTC-GAGGATCA-GGAACTTGGCCAGCTTCTGACAGATATCTTAA 1633
BSNT_03760___ 1622 TGCTTCAGGTTAATCAAGAGCTTAGTGAAGCCGAGTTATCAGATTATGTA 1671
||||||||||.||..||||..|.||||||||.||.|||||.|||||||||
BL03681___dna 1634 TGCTTCAGGTGAACGAAGAATTAAGTGAAGCGGAATTATCTGATTATGTA 1683
BSNT_03760___ 1672 AAAAAAGTGTTGAATCAAAGAAATTGGTCAATGATAAAAGAAAAAGAGGC 1721
|||||||||||||||.|..||||||||||||||||||||||||||||.||
BL03681___dna 1684 AAAAAAGTGTTGAATTATCGAAATTGGTCAATGATAAAAGAAAAAGAAGC 1733
BSNT_03760___ 1722 GGAAAGAGCCGAAGCCGAAAGGCAAAAAGATTTTTTAAGAGCTGCTTCTC 1771
.|.|||.||.||||||||.|||||||||||.|||.|.|.|||.||..||.
BL03681___dna 1734 TGCAAGGGCGGAAGCCGAGAGGCAAAAAGACTTTATCAAAGCGGCGACTT 1783
BSNT_03760___ 1772 TGGCTCAAGAAATCGTTACATTGAACCGATCTTTAAAATAA 1812
||||.||.|||||.||||..||||||||.||..|.||||||
BL03681___dna 1784 TGGCGCAGGAAATTGTTAAGTTGAACCGTTCGCTGAAATAA 1824
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