Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02747 and BL03658
See
DNA alignment /
Visit
BSNT_02747 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence pep-align/BSNT_02747___tdh.1.5803.seq
# -bsequence pep-align/BL03658___tdh.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02747___tdh-BL03658___tdh.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02747___tdh-BL03658___tdh.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02747___tdh
# 2: BL03658___tdh
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 264/347 (76.1%)
# Similarity: 293/347 (84.4%)
# Gaps: 1/347 ( 0.3%)
# Score: 1403.0
#
#
#=======================================
BSNT_02747___ 1 MQSGKMKALMKKDGAFGAVLTEVPIPEIDKHEVLIKVKAASICGTDVHIY 50
..|.||||:||.|..||....||||:|||||||||||||||||||||||
BL03658___tdh 1 -MDGNMKALIKKPGEPGASFELVPIPKIDKHEVLIKVKAASICGTDVHIY 49
BSNT_02747___ 51 NWDQWARQRIKTPYVFGHEFSGIVEDVGENVISVKVGEYVSAETHIVCGE 100
|||:||:.|:|.||||||||||.|..|||||.:||.|||||||||||||:
BL03658___tdh 50 NWDEWAKSRVKPPYVFGHEFSGEVVQVGENVTTVKEGEYVSAETHIVCGK 99
BSNT_02747___ 101 CVPCLTGKSHVCTNTAIIGVDTAGCFAEYVKVPADNIWRNPADMDPSIAS 150
|:||||||.|||..|.|:||||.||||||||:||.|||:|||.|...:||
BL03658___tdh 100 CLPCLTGKEHVCKKTLILGVDTDGCFAEYVKMPAANIWKNPAGMPEDLAS 149
BSNT_02747___ 151 IQEPLGNAVHTVLESQPAGGTTAVIGCGPIGLMAVAVAKAAGASQVIAID 200
|||||||||||||....||...||:|||||||||||||||:||:||||||
BL03658___tdh 150 IQEPLGNAVHTVLTGMTAGVKVAVVGCGPIGLMAVAVAKASGAAQVIAID 199
BSNT_02747___ 201 KNEYRLRLAKQMGATCTVSIEKENPLKIVSALTSGEGADLVCEMSGHPSA 250
||||||.||.|||||..:|:|||:|||.|||||:||||||||||||||:|
BL03658___tdh 200 KNEYRLDLALQMGATDIISVEKEDPLKNVSALTNGEGADLVCEMSGHPTA 249
BSNT_02747___ 251 IAQGLAMAANGGRFHILSLPEHPVTIDLTNKVVFKGLTIQGITGRKMFST 300
|.|.|.|||||||.|:||||||||.||:||.:||||||:|||||||||.|
BL03658___tdh 250 IRQSLKMAANGGRVHVLSLPEHPVCIDMTNDIVFKGLTVQGITGRKMFET 299
BSNT_02747___ 301 WRQVSQLISSNVIDLAPVITHQFPLEEFEKGFELMRSGQCGKVILIP 347
|||||.|:.|..|.:.|||||:||:|||||||||||.||||||:|||
BL03658___tdh 300 WRQVSGLLQSGTIQIKPVITHRFPMEEFEKGFELMRKGQCGKVVLIP 346
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.