Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02747 and BL03658
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02747___tdh.1.5803.seq
# -bsequence dna-align/BL03658___tdh.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02747___tdh-BL03658___tdh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02747___tdh-BL03658___tdh.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02747___tdh
# 2: BL03658___tdh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 744/1101 (67.6%)
# Similarity: 744/1101 (67.6%)
# Gaps: 117/1101 (10.6%)
# Score: 2392.0
#
#
#=======================================
BSNT_02747___ 1 ATGCAGAGT-----GGAAAGATGAAAGCTCTAATGAAAAA------GGA- 38
| |||||.||||||||.||.||.||.|| |||
BL03658___tdh 1 --------TTGGACGGAAATATGAAAGCGCTTATCAAGAAGCCGGGGGAG 42
BSNT_02747___ 39 CGGGGCG-----TTCGGTGCTGTGCTGACTGAAGTTCCCATTCCTGAGAT 83
|.||||| ||| |.||| .||.||.|||||..||||
BL03658___tdh 43 CCGGGCGCCAGCTTC------GAGCT------CGTCCCGATTCCGAAGAT 80
BSNT_02747___ 84 TGATAAACATGAAGTCCTCATAAAAGTGAAAGCCGCTTCCATATGCGGCA 133
.||.|||||.||.|||||.||.|||||.||||||||.||.||.|||||.|
BL03658___tdh 81 CGACAAACACGAGGTCCTGATCAAAGTCAAAGCCGCATCGATTTGCGGAA 130
BSNT_02747___ 134 CGGATGTCCACATTTATAATTGGGATCAATGGGCACGTCAGAGAA----- 178
|.||||||||.|||||||||||||||.||||||| ||.||
BL03658___tdh 131 CCGATGTCCATATTTATAATTGGGATGAATGGGC------GAAAAGCAGG 174
BSNT_02747___ 179 -TCAAAACACCCTATGTTTTCGGCCATGAGTTCAGCGGCATCGTAGAGGA 227
|.|||.|.||.|||||.||||||||.||.||...||||...||.|...|
BL03658___tdh 175 GTTAAACCGCCTTATGTGTTCGGCCACGAATTTTCCGGCGAAGTTGTTCA 224
BSNT_02747___ 228 CGTGGGAGAGAATGTCATTAGTGTAAAAGTGGGAGAGTATGTGTCTGCGG 277
.|||||.||.|||||.|.||..|||||||..||.||||||||.||.||.|
BL03658___tdh 225 AGTGGGGGAAAATGTGACTACGGTAAAAGAAGGGGAGTATGTTTCGGCAG 274
BSNT_02747___ 278 AAACACACATTGTCTGTGGTGAATGTG--TCCCTTGCCTAACAGGAAAAT 325
||||.|||||.||.||.| |||.||| |.||.||..|.||.||||||.
BL03658___tdh 275 AAACGCACATCGTTTGCG--GAAAGTGCCTGCCGTGTTTGACCGGAAAAG 322
BSNT_02747___ 326 CTCATGTGTGTACCAATACTGCT-ATAATCGGAGTGGACACGGCAGGCTG 374
..|||||.||.|..||.|| ||| ||..||||.||.||.||.|..|||||
BL03658___tdh 323 AGCATGTCTGCAAAAAAAC-GCTGATTCTCGGTGTCGATACAGACGGCTG 371
BSNT_02747___ 375 TTTTGCGGAGTATGTAAAAGTTCCAGCTGATAATATTTGGAGAAATCCCG 424
||||||.||.|||||.|||.|.||.||.|..||.|||||||.|||.||.|
BL03658___tdh 372 TTTTGCTGAATATGTCAAAATGCCCGCCGCAAACATTTGGAAAAACCCGG 421
BSNT_02747___ 425 CTGATATGGACCCGTCGA--TTGCTTCCATTCAAGAGCCTTTAGGAAATG 472
|.|..||| ||.|..|| |.|||||.||||||||.||..|.|||||||
BL03658___tdh 422 CCGGCATG--CCTGAGGATCTCGCTTCTATTCAAGAACCGCTCGGAAATG 469
BSNT_02747___ 473 CAGTTCATACCGTACT--CGAGAGCCA-GCCTGCAGGAG-GAACGACTGC 518
|.||.|||||.||.|| ||.|| | |.|.||.|||| |||.|.| ||
BL03658___tdh 470 CCGTGCATACGGTTCTGACGGGA---ATGACGGCTGGAGTGAAAGTC-GC 515
BSNT_02747___ 519 AGTGATTGGATGCGGACCGATTGGTCTTATGGCTGTTGCGGTTGCAAAAG 568
.||..|.||.|||||||||||.||.||.|||||.||.||.||||||||||
BL03658___tdh 516 TGTCGTCGGCTGCGGACCGATCGGACTGATGGCCGTGGCAGTTGCAAAAG 565
BSNT_02747___ 569 CAGCAGGAGCTTCTCAGGTGATAGCGATTGATAAGAATGAATACAGGCT- 617
|..|.||.||..|.||||||||.||.||.|||||.||||||||||||||
BL03658___tdh 566 CGTCTGGGGCGGCGCAGGTGATCGCCATCGATAAAAATGAATACAGGCTC 615
BSNT_02747___ 618 GAGGCTTGCAAAACAAATGGGAGCGACTTGTACTGTTTCTATTGAAAAAG 667
|| .||||||...||||||||.||.||...||...|.||..|||||||||
BL03658___tdh 616 GA-CCTTGCATTGCAAATGGGGGCAACCGATATCATCTCCGTTGAAAAAG 664
BSNT_02747___ 668 AAAACCCGCTCAAAATTGTAAGCGCTTTAACGAGTGGGGAAGGAGCAGAT 717
||.|.||||||||||.|||||||||||||||.|.|||.|||||.||.||
BL03658___tdh 665 AAGATCCGCTCAAAAATGTAAGCGCTTTAACAAATGGTGAAGGGGCGGA- 713
BSNT_02747___ 718 CTT-GTTTGTGAGATGTCGGGTCATCCCTCAGCGATTGCCCAAGGTCTTG 766
||| |||||.||.|||||.||.|||||..|.||.||...||||.||.|..
BL03658___tdh 714 CTTGGTTTGCGAAATGTCAGGCCATCCGACGGCAATCCGCCAAAGTTTAA 763
BSNT_02747___ 767 CGATGGCTGCGAATGGCGGAAGATTTCATATTCTCAGCTTGCCGGAACAT 816
..|||||.||.||.||.|||.|..|||||.|..|.||||||||.||.|||
BL03658___tdh 764 AAATGGCGGCAAACGGAGGACGGGTTCATGTCTTAAGCTTGCCTGAGCAT 813
BSNT_02747___ 817 CCGGT-------GACAATTGATTTGACGAATAAAGTGGTATTTAAAGGGC 859
||.|| |||| ||||.|||.|..|.||.||||||||..
BL03658___tdh 814 CCCGTATGCATCGACA-------TGACAAATGATATCGTCTTTAAAGGAT 856
BSNT_02747___ 860 TTACCATCCAAGGAATCACAGGAAGAAAAATGTTTTCAACATGGCGCCAG 909
|.||..||||||||||.||.||..|.|||||||||..|||.|||.|.|||
BL03658___tdh 857 TGACGGTCCAAGGAATTACCGGCCGCAAAATGTTTGAAACGTGGAGACAG 906
BSNT_02747___ 910 GT-----GTCT----CAGTTGATCAG------TTCAAACGTGATCGATCT 944
|| |||| || |||.| ||||| |||.|
BL03658___tdh 907 GTCAGCGGTCTCCTCCA----ATCCGGCACGATTCAA-----ATCAA--- 944
BSNT_02747___ 945 TGCACCTGTTATTACCCATCAGTTT-CCGTTAGAGGAGTTTGAAAAAGGT 993
.|||||.||.||.|| |.|||| |||.|.||.||||||||||||||.
BL03658___tdh 945 ---GCCTGTCATCACTCA-CCGTTTCCCGATGGAAGAGTTTGAAAAAGGC 990
BSNT_02747___ 994 TTCGAACTGATGAGAAGCGGGCAGTGCGGAAAAGTAATTTTAATTCCATA 1043
||.|||||||||||||..|||||.|||||.|||||..|..|.||.||.||
BL03658___tdh 991 TTTGAACTGATGAGAAAAGGGCAATGCGGCAAAGTCGTACTGATACCGTA 1040
BSNT_02747___ 1044 A 1044
.
BL03658___tdh 1041 G 1041
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