Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02744 and BL03656

See DNA alignment / Visit BSNT_02744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence pep-align/BSNT_02744___ymdB.1.5803.seq
#    -bsequence pep-align/BL03656___ymdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02744___ymdB-BL03656___ymdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02744___ymdB-BL03656___ymdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02744___ymdB
# 2: BL03656___ymdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     227/265 (85.7%)
# Similarity:   249/265 (94.0%)
# Gaps:           1/265 ( 0.4%)
# Score: 1222.0
# 
#
#=======================================

BSNT_02744___      1 MRILFIGDVVGSPGRDMVKEYVPKLKTKYKPHFTIINGENAAHGKGLTEK     50
                     |||||||||||||||||:|.|:||||.||||:..|:||||||||||:|||
BL03656___ymd      1 MRILFIGDVVGSPGRDMIKTYLPKLKLKYKPNAVIVNGENAAHGKGITEK     50

BSNT_02744___     51 IYHRLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGTPGKGI    100
                     |||:|||:|||.:|||||||||:||||||||.|.:|||||||||||||||
BL03656___ymd     51 IYHQLIQAGADVLTMGNHTWDKREIFDFIDDAPQIVRPANFPEGTPGKGI    100

BSNT_02744___    101 TYVKANG-KELAVINLQGRTFLPPLDDPFLKADELIAEAAKRTPYIFIDF    149
                     ||:|.|| |||||||||||||||.:|.||.||||||.||:||||:|||||
BL03656___ymd    101 TYIKTNGSKELAVINLQGRTFLPAIDCPFRKADELIEEASKRTPFIFIDF    150

BSNT_02744___    150 HAEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMT    199
                     ||||||||.|:|||||||.|||||||||||||||||||||||||||||||
BL03656___ymd    151 HAEATSEKQAIGWYTDGRVSAVVGTHTHVQTADNRILPKGTAYITDVGMT    200

BSNT_02744___    200 GPYDGILGMDRETIIKRFKTNLPVRFTVAEGKTTLSGVVIDIDDQTKKAV    249
                     ||||||||:|||||||||||:|||||.:|||:|||||||||||:|:||||
BL03656___ymd    201 GPYDGILGVDRETIIKRFKTSLPVRFEIAEGRTTLSGVVIDIDEQSKKAV    250

BSNT_02744___    250 KIERILINDDHMFFE    264
                     ||:||||||||||||
BL03656___ymd    251 KIDRILINDDHMFFE    265


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.