Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02744 and BL03656

See Amino acid alignment / Visit BSNT_02744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:30
# Commandline: needle
#    -asequence dna-align/BSNT_02744___ymdB.1.5803.seq
#    -bsequence dna-align/BL03656___ymdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02744___ymdB-BL03656___ymdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02744___ymdB-BL03656___ymdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02744___ymdB
# 2: BL03656___ymdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 802
# Identity:     606/802 (75.6%)
# Similarity:   606/802 (75.6%)
# Gaps:          11/802 ( 1.4%)
# Score: 2237.0
# 
#
#=======================================

BSNT_02744___      1 ATGAGAATTTTATTTATCGGAGATGTTGTCGGTTCACCGGGCCGTGACAT     50
                     |||||||||||||||||.||||||||.||||||||.||.|||.|.|||||
BL03656___ymd      1 ATGAGAATTTTATTTATTGGAGATGTCGTCGGTTCGCCCGGCAGAGACAT     50

BSNT_02744___     51 GGTCAAAGAATATGTACCAAAGCTAAAAACAAAATATAAGCCTCACTTTA    100
                     |.|||||...|||.|.||.|||||.||....||||||||.||..|   |.
BL03656___ymd     51 GATCAAAACCTATTTGCCGAAGCTGAAGCTCAAATATAAACCGAA---TG     97

BSNT_02744___    101 C---CATTATTAATGGTGAAAACGCCGCACATGGAAAAGGCCTGACGGAA    147
                     |   |||..|.||.||.||||||||||||||.|||||||||.|.||.|||
BL03656___ymd     98 CCGTCATCGTCAACGGAGAAAACGCCGCACACGGAAAAGGCATTACCGAA    147

BSNT_02744___    148 AAAATTTATCA-CAGATTAATCCAGTCCGGCGCAGATGCAATCACAATGG    196
                     |||||.||||| |||.|.|.||.|| |.||.||.||.|...||||.||||
BL03656___ymd    148 AAAATATATCACCAGCTCATTCAAG-CTGGAGCCGACGTTCTCACGATGG    196

BSNT_02744___    197 GGAACCATACATGGGACAAAAAAGAAATATTTGATTTTATAGATGACGTT    246
                     |.|||||.||||||||.||||..|||||||||||||||||.|||||.|..
BL03656___ymd    197 GAAACCACACATGGGATAAAAGGGAAATATTTGATTTTATTGATGATGCG    246

BSNT_02744___    247 CCGAACTTGGTTCGCCCGGCAAACTTTCCTGAAGGAACACCGGGGAAAGG    296
                     |||.|..|.||..|.||.||.||.|||||.||.||.||.||.||.|||||
BL03656___ymd    247 CCGCAGATCGTCAGACCCGCCAATTTTCCCGAGGGCACGCCTGGAAAAGG    296

BSNT_02744___    297 GATCACATATGTGAAAGCAAACGG---CAAAGAACTAGCAGTCATTAATT    343
                     .||||||||..|.|||.|||||||   .||.|||||.||.||.||.||||
BL03656___ymd    297 CATCACATACATAAAAACAAACGGTTCGAAGGAACTGGCTGTGATCAATT    346

BSNT_02744___    344 TGCAGGGACGTACGTTTTTGCCGCCGCTTGATGACCCGTTTTTAAAAGCG    393
                     ||||.||.||.||.|||.||||..||.|.|||..|||.|||..||||||.
BL03656___ymd    347 TGCAAGGCCGCACTTTTCTGCCTGCGATCGATTGCCCATTTCGAAAAGCT    396

BSNT_02744___    394 GATGAATTGATCGCAGAAGCTGCGAAAAGAACACCGTACATTTTTATCGA    443
                     ||||||||.||.|.||||||..|.||||||||.||||.|||.||||||||
BL03656___ymd    397 GATGAATTAATAGAAGAAGCGTCAAAAAGAACGCCGTTCATCTTTATCGA    446

BSNT_02744___    444 CTTTCATGCCGAAGCGACAAGTGAAAAGCTCGCACTTGGCTGGTACACGG    493
                     .||||||||||||||||||||.|||||||..||..|.||||||||.||||
BL03656___ymd    447 TTTTCATGCCGAAGCGACAAGCGAAAAGCAGGCGATCGGCTGGTATACGG    496

BSNT_02744___    494 ATGGGAGGGCGTCGGCTGTAGTAGGAACTCATACACACGTGCAAACGGCG    543
                     |.||..|.|..||.||.||.||.|||||.||.||.||.||.||.||.|||
BL03656___ymd    497 ACGGCCGCGTTTCAGCGGTTGTCGGAACGCACACGCATGTTCAGACAGCG    546

BSNT_02744___    544 GATAACCGCATTTTGCCGAAGGGAACGGCATATATTACTGATGTGGGAAT    593
                     ||.|||||||||.|.|||||.||.|||||||||||.||.||.|||||.||
BL03656___ymd    547 GACAACCGCATTCTTCCGAAAGGCACGGCATATATAACAGACGTGGGGAT    596

BSNT_02744___    594 GACTGGCCCATATGACGGTATACTGGGGATGGACAGAGAGACGATTATTA    643
                     ||||||.||.||.||||||||.||.||..|.|||.|.|||||||||||.|
BL03656___ymd    597 GACTGGGCCTTACGACGGTATTCTCGGCGTCGACCGCGAGACGATTATCA    646

BSNT_02744___    644 AGCGATTCAAAACGAACCTTCCAGTCCGGTTTACTGTCGCTGAAGGAAAA    693
                     ||||.||.|||||||.|||.||.|||||.|||....|.||.|||||....
BL03656___ymd    647 AGCGTTTTAAAACGAGCCTGCCCGTCCGTTTTGAGATTGCCGAAGGCCGC    696

BSNT_02744___    694 ACAACGCTCAGCGGAGTTGTGATTGACATTGACGATCAAACGAAAAAAGC    743
                     |||||.||.|||||||||||.||.|||||.|||||.||.|..||.|||||
BL03656___ymd    697 ACAACTCTGAGCGGAGTTGTCATCGACATCGACGAACAGAGCAAGAAAGC    746

BSNT_02744___    744 CGTGAAAATTGAGCGTATTTTAATCAACGATGATCACATGTTCTTTGAAT    793
                     |||.||||||||.||.||.|||||.||.||.||.||||||||.|||||||
BL03656___ymd    747 CGTTAAAATTGACCGGATATTAATTAATGACGACCACATGTTTTTTGAAT    796

BSNT_02744___    794 AG    795
                     |.
BL03656___ymd    797 AA    798


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