Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02353 and BL03653

See DNA alignment / Visit BSNT_02353 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_02353___ykuE.1.5803.seq
#    -bsequence pep-align/BL03653___ykuE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02353___ykuE-BL03653___ykuE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02353___ykuE-BL03653___ykuE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02353___ykuE
# 2: BL03653___ykuE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     189/286 (66.1%)
# Similarity:   221/286 (77.3%)
# Gaps:           1/286 ( 0.3%)
# Score: 1018.0
# 
#
#=======================================

BSNT_02353___      1 MKKMSRRQFLKGMFGALAAGALTAGGGYGYARYLEPHMIETTEHTIKSSL     50
                     ||..||||||||..|..|||..||.||.||||||||||:||....|:..|
BL03653___yku      1 MKNPSRRQFLKGFLGLAAAGLFTAAGGLGYARYLEPHMLETNFIPIRHRL     50

BSNT_02353___     51 IPHGFDGFKIVQFSDAHLSDYFTLEDLKTVILTINESKPDLIVFTGDIID    100
                     ||.|||.|:||||||.|||:|||.::|..|:..:|...||||||:||:||
BL03653___yku     51 IPKGFDQFRIVQFSDTHLSEYFTADELSNVVSQVNALSPDLIVFSGDLID    100

BSNT_02353___    101 NPDTYQHHQAVIPLLRKLNAPFGKLCIYGNHDHGGYGTAVYKSLMTAGGF    150
                     .|..|:.|:..:..|:||:||:|||.|:||||||||||.||::||.:.||
BL03653___yku    101 KPHRYREHERAVSALKKLSAPYGKLAIFGNHDHGGYGTKVYQTLMASAGF    150

BSNT_02353___    151 TVYRNGYQTLSLADGSKIEIASLDDLMLGNPDYEGTLSRLSDRLFSILLV    200
                     .|.||....|.|.|||.||||||||||||.|||||.||:||.:.||||||
BL03653___yku    151 RVLRNDLLKLELIDGSVIEIASLDDLMLGRPDYEGILSKLSKKAFSILLV    200

BSNT_02353___    201 HEPDAALKTTDYPVNLQLSGHTHGGQIQLPFYGPIITPPYGKVYTEGMYQ    250
                     |||||||....||||||:||||||||||:|.:||:||||||::||||||:
BL03653___yku    201 HEPDAALTANQYPVNLQISGHTHGGQIQIPVFGPLITPPYGEIYTEGMYE    250

BSNT_02353___    251 TGSTHIYVNRGLGMTRLPLRFLAKPEITVFTLKSTN    286
                     |....||||||:|.||||||||:|||||||.|:|. 
BL03653___yku    251 TAGMKIYVNRGIGTTRLPLRFLSKPEITVFQLESI-    285


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