Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02350 and BL03650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_02350___ykuC.1.5803.seq
# -bsequence pep-align/BL03650___ykuC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02350___ykuC-BL03650___ykuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02350___ykuC-BL03650___ykuC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02350___ykuC
# 2: BL03650___ykuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity: 308/433 (71.1%)
# Similarity: 364/433 (84.1%)
# Gaps: 3/433 ( 0.7%)
# Score: 1633.5
#
#
#=======================================
BSNT_02350___ 1 MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAEL 50
||:|||||||||||||.|||||||||||||||||||||||||:|||:|||
BL03650___yku 1 MDLFKNRNFVRLFFAAFASQMGTTVGNMAFAFFLLDRFSSQPAYTTIAEL 50
BSNT_02350___ 51 MYSLPTIFVFLIVGVVADRFDRKKVAENCDWIRAGLTVVLFFTLFTGNIP 100
||||||:|||.|||||||||||||||||||||||||||||||.|:...||
BL03650___yku 51 MYSLPTVFVFFIVGVVADRFDRKKVAENCDWIRAGLTVVLFFVLYLQIIP 100
BSNT_02350___ 101 LVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVF 150
|||.:|||||||||||:|||.|||||||.|:.|||||||||||||:|::|
BL03650___yku 101 LVFLVLFIRSAVTKFFYPAEASLVQAILRKDQYAKAAGLNQMLFSLFLLF 150
BSNT_02350___ 151 GVGIGAFMYNTIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSW 200
|||||||||.|||:.|||.|||||||:||.|||||.||..||:|||...|
BL03650___yku 151 GVGIGAFMYKTIGLHGAIALDFVSFIVSGFLIRSCDIPLAARKPNGNKGW 200
BSNT_02350___ 201 RKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNGGFAVLPMFTM 250
:..:||||:.||:|||:|||||||||||:||:||||.|:||.:|||||.|
BL03650___yku 201 KNMTVKDSMRDFKEGIVYILKNKLLASLVFGYFIFGLVSGGLSVLPMFKM 250
BSNT_02350___ 251 KYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTIISKKVKPHFLMSIPIFI 300
||.|:||.||||||:|||.||.|||.|..:..::.|||||.::||:||||
BL03650___yku 251 KYELSPDSYEWHTSLFTIVLGIGLLTGIAVAALLEKKVKPAYMMSVPIFI 300
BSNT_02350___ 301 AGLLIFVLGYTNILWVYYAAAFALGMCIGPINIAIGGWMPKIVHPKLMGR 350
||..|.:||:|:.|.|||:|||..|:||||||.|:|||:||||||:||||
BL03650___yku 301 AGAFIILLGFTDQLPVYYSAAFLAGICIGPINTALGGWIPKIVHPRLMGR 350
BSNT_02350___ 351 VSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF 400
|||..||..|.|||..||::|:|||..::::||:|||:..||||..::||
BL03650___yku 351 VSGWTDPLTMLAQSSALGMIAVLFPGIIADVDYIYYGLAGIILLAALYYF 400
BSNT_02350___ 401 IALPKYSAQAVEVNVQEAFQEQPKKKAR--SV- 430
|||||.||::.|::||.|.:.|...||: ||
BL03650___yku 401 IALPKLSAESAEIDVQAALKRQKNTKAKMNSVL 433
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