Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02349 and BL03649

See DNA alignment / Visit BSNT_02349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_02349___ykyB.1.5803.seq
#    -bsequence pep-align/BL03649___ykyB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02349___ykyB-BL03649___ykyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02349___ykyB-BL03649___ykyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02349___ykyB
# 2: BL03649___ykyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     127/154 (82.5%)
# Similarity:   140/154 (90.9%)
# Gaps:           1/154 ( 0.6%)
# Score: 675.0
# 
#
#=======================================

BSNT_02349___      1 MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVK     50
                     ||||.:||:|:|||||||||:||||||||||.||||||||||:|||||:.
BL03649___yky      1 MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLN     50

BSNT_02349___     51 EGKGKKIGLHFSKNPRFSQQQSDVLISIGDYYFHMPPTKEDFEHLPHLGT    100
                     ||||||:||||||||||||||||||||:|||:||||||||||.:||||||
BL03649___yky     51 EGKGKKVGLHFSKNPRFSQQQSDVLISLGDYFFHMPPTKEDFANLPHLGT    100

BSNT_02349___    101 LNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLG    150
                     ||.|||||||.|||..||.|||.|.|:||||||.||::|| .||||||||
BL03649___yky    101 LNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPA-SKPVFKKLG    149

BSNT_02349___    151 ESYF    154
                     ||||
BL03649___yky    150 ESYF    153


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.